Gene BamMC406_3609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3609 
Symbol 
ID6179567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp549615 
End bp550382 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content63% 
IMG OID641683379 
ProductABC transporter related 
Protein accessionYP_001810292 
Protein GI172062641 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4598] ABC-type histidine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAGC TCACCGTTGA TAACCTCCAC AAGAAGTTCG GCGACAACGA GGTGTTGAAG 
GGCGTGTCGA TGAAGGCGAA AGCCGGCGAC GTGATCAGCA TCATCGGCTC GAGCGGCTCC
GGCAAGAGCA CGTTCCTGCG CTGCATCAAC TTCCTCGAGC AGCCGTGCTC GGGGCAGATC
ACGATCGGCA GCGAGCCGAT CGAGACCGCC CGCGACCGCA ACGGCTCGCT GCGCGTGGCC
GACCAGAAGC AGCTGCAGCG GATGCGCACG AAGCTCGCGA TGGTGTTCCA GCACTTCAAC
CTGTGGTCGC ACATGACGGT GCTCGAGAAC GTGATCGAGG CGCCGATGGC CGTGCTCGGA
ATCGGCAAGG AAGCAGCGGT CGAGCGCGCG CGCAAGTATC TGGAGAAGGT CGGTCTCGCG
CCGCGCGTCG AGGGCATGTA TCCGTCGCAC CTGTCGGGCG GCCAGCAGCA GCGCGTCGCG
ATCGCGCGTG CGCTCGCGAT GGAGCCCGAG GTGATGCTGT TCGACGAGCC GACTTCCGCG
CTCGATCCGG AACTCGTCGG CGAAGTGTTG AAGGTGATGC AGAAGCTGGC CGAGGAAGGC
CGCACGATGG TCGTCGTCAC GCATGAGATG GGCTTCGCGC GCAACGTGTC GAATCATGTG
ATCTTCCTGC ATCAGGGGAA GATCGAGGAA GAGGGCGATC CGCAGGAGAT TCTCGTCAAT
CCGAAAAGCG AGCGGCTCGG GCAATTCCTG TCGGGGCGGT TGAAGTAA
 
Protein sequence
MYKLTVDNLH KKFGDNEVLK GVSMKAKAGD VISIIGSSGS GKSTFLRCIN FLEQPCSGQI 
TIGSEPIETA RDRNGSLRVA DQKQLQRMRT KLAMVFQHFN LWSHMTVLEN VIEAPMAVLG
IGKEAAVERA RKYLEKVGLA PRVEGMYPSH LSGGQQQRVA IARALAMEPE VMLFDEPTSA
LDPELVGEVL KVMQKLAEEG RTMVVVTHEM GFARNVSNHV IFLHQGKIEE EGDPQEILVN
PKSERLGQFL SGRLK