Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3609 |
Symbol | |
ID | 6179567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 549615 |
End bp | 550382 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641683379 |
Product | ABC transporter related |
Protein accession | YP_001810292 |
Protein GI | 172062641 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4598] ABC-type histidine transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAAGC TCACCGTTGA TAACCTCCAC AAGAAGTTCG GCGACAACGA GGTGTTGAAG GGCGTGTCGA TGAAGGCGAA AGCCGGCGAC GTGATCAGCA TCATCGGCTC GAGCGGCTCC GGCAAGAGCA CGTTCCTGCG CTGCATCAAC TTCCTCGAGC AGCCGTGCTC GGGGCAGATC ACGATCGGCA GCGAGCCGAT CGAGACCGCC CGCGACCGCA ACGGCTCGCT GCGCGTGGCC GACCAGAAGC AGCTGCAGCG GATGCGCACG AAGCTCGCGA TGGTGTTCCA GCACTTCAAC CTGTGGTCGC ACATGACGGT GCTCGAGAAC GTGATCGAGG CGCCGATGGC CGTGCTCGGA ATCGGCAAGG AAGCAGCGGT CGAGCGCGCG CGCAAGTATC TGGAGAAGGT CGGTCTCGCG CCGCGCGTCG AGGGCATGTA TCCGTCGCAC CTGTCGGGCG GCCAGCAGCA GCGCGTCGCG ATCGCGCGTG CGCTCGCGAT GGAGCCCGAG GTGATGCTGT TCGACGAGCC GACTTCCGCG CTCGATCCGG AACTCGTCGG CGAAGTGTTG AAGGTGATGC AGAAGCTGGC CGAGGAAGGC CGCACGATGG TCGTCGTCAC GCATGAGATG GGCTTCGCGC GCAACGTGTC GAATCATGTG ATCTTCCTGC ATCAGGGGAA GATCGAGGAA GAGGGCGATC CGCAGGAGAT TCTCGTCAAT CCGAAAAGCG AGCGGCTCGG GCAATTCCTG TCGGGGCGGT TGAAGTAA
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Protein sequence | MYKLTVDNLH KKFGDNEVLK GVSMKAKAGD VISIIGSSGS GKSTFLRCIN FLEQPCSGQI TIGSEPIETA RDRNGSLRVA DQKQLQRMRT KLAMVFQHFN LWSHMTVLEN VIEAPMAVLG IGKEAAVERA RKYLEKVGLA PRVEGMYPSH LSGGQQQRVA IARALAMEPE VMLFDEPTSA LDPELVGEVL KVMQKLAEEG RTMVVVTHEM GFARNVSNHV IFLHQGKIEE EGDPQEILVN PKSERLGQFL SGRLK
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