Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3608 |
Symbol | |
ID | 6179566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 548883 |
End bp | 549596 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641683378 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001810291 |
Protein GI | 172062640 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.925152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGAAC TCATCGGCCA GTACTGGCAA AACTATCTCT ACACCGACGG CTATCGCTTC AGCGGCCTCG CGATCACGCT GTGGCTGCTG GTCGTCTCGA TCGCGTTCGG CTTCGCGCTG GCCGTGCCGC TCGCGATCGC GCGCGCGTCG TCGAACCGCT GGATTTCCGG CCCGGTGTGG CTCTACACGT ACGTGTTCCG CGGCACGCCG CTCTACGTGC AGCTGCTGAT GTGCTACACC GGCATCTACA GCCTGCAGGT CGTGCACGAC CACGTGCTGC TCGACACGTT CTTCCGCAAC GCGATGAACT GCACGCTGCT CGCATTCGTG CTGAACGAAT GCGCGTATGC GACCGAGATC TTCGCGGGCG CGATCAAGGC CACGTCGGCC GGCGAGATCG AGGCCGGGAT GGCGTACGGG ATGTCGCGCT TCAAGCTCTA TACGCGCATC ATCCTGCCGT CCGCGCTGCG CCGCTCGCTG CCCAGCTACA GCAACGAAGT GATCCTGATG CTGCACGCGA CGACGCTCGC GTTCACCGCG ACCGTGCCCG ACATCCTGAA GGTCACGCGC GACGTCAACT CCGCGACGTA CATGTCGTTC CAGGCCTACG GCATCGCGGC CGTGCTGTAC GCCATCGTCG TGTTCACGCT CATCTGGGCG TTCCGCAAGC TCGAGACGCG CTGGCTCGCG TACCTCTCGC CGCGCGGCCA TTAA
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Protein sequence | MIELIGQYWQ NYLYTDGYRF SGLAITLWLL VVSIAFGFAL AVPLAIARAS SNRWISGPVW LYTYVFRGTP LYVQLLMCYT GIYSLQVVHD HVLLDTFFRN AMNCTLLAFV LNECAYATEI FAGAIKATSA GEIEAGMAYG MSRFKLYTRI ILPSALRRSL PSYSNEVILM LHATTLAFTA TVPDILKVTR DVNSATYMSF QAYGIAAVLY AIVVFTLIWA FRKLETRWLA YLSPRGH
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