Gene BamMC406_3608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3608 
Symbol 
ID6179566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp548883 
End bp549596 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content64% 
IMG OID641683378 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001810291 
Protein GI172062640 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4160] ABC-type arginine/histidine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.925152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGAAC TCATCGGCCA GTACTGGCAA AACTATCTCT ACACCGACGG CTATCGCTTC 
AGCGGCCTCG CGATCACGCT GTGGCTGCTG GTCGTCTCGA TCGCGTTCGG CTTCGCGCTG
GCCGTGCCGC TCGCGATCGC GCGCGCGTCG TCGAACCGCT GGATTTCCGG CCCGGTGTGG
CTCTACACGT ACGTGTTCCG CGGCACGCCG CTCTACGTGC AGCTGCTGAT GTGCTACACC
GGCATCTACA GCCTGCAGGT CGTGCACGAC CACGTGCTGC TCGACACGTT CTTCCGCAAC
GCGATGAACT GCACGCTGCT CGCATTCGTG CTGAACGAAT GCGCGTATGC GACCGAGATC
TTCGCGGGCG CGATCAAGGC CACGTCGGCC GGCGAGATCG AGGCCGGGAT GGCGTACGGG
ATGTCGCGCT TCAAGCTCTA TACGCGCATC ATCCTGCCGT CCGCGCTGCG CCGCTCGCTG
CCCAGCTACA GCAACGAAGT GATCCTGATG CTGCACGCGA CGACGCTCGC GTTCACCGCG
ACCGTGCCCG ACATCCTGAA GGTCACGCGC GACGTCAACT CCGCGACGTA CATGTCGTTC
CAGGCCTACG GCATCGCGGC CGTGCTGTAC GCCATCGTCG TGTTCACGCT CATCTGGGCG
TTCCGCAAGC TCGAGACGCG CTGGCTCGCG TACCTCTCGC CGCGCGGCCA TTAA
 
Protein sequence
MIELIGQYWQ NYLYTDGYRF SGLAITLWLL VVSIAFGFAL AVPLAIARAS SNRWISGPVW 
LYTYVFRGTP LYVQLLMCYT GIYSLQVVHD HVLLDTFFRN AMNCTLLAFV LNECAYATEI
FAGAIKATSA GEIEAGMAYG MSRFKLYTRI ILPSALRRSL PSYSNEVILM LHATTLAFTA
TVPDILKVTR DVNSATYMSF QAYGIAAVLY AIVVFTLIWA FRKLETRWLA YLSPRGH