Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3601 |
Symbol | |
ID | 6179186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 542469 |
End bp | 543386 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641683371 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001810284 |
Protein GI | 172062633 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.773221 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTTGA GACACCTCCG CTACTTCGTC GCCGTTGCCG AGGAGCGGAA TTTCACGCGT GCGGCCGAGC GCCTGCACAT CGCGCAGCCG CCGCTCAGCC GGCAGATCCA GCAGCTCGAG GAGGCGCTCG GCGTGCCGCT GTTCGAGCGC AACGCGCGGC CGCTGAAGCT GACCGACGCG GGACGGTTCT TCTATTCGCA CGCGGTGCAG CTGCTCGCGC AGACGACCGA GCTCGAATCG ATGACGAAGC GGGTCGGCAA GATCGAGCGC AGCATGTCGG TCGGTTTCGT CGGCTCGACG CTGTACGGGA TGCTGCCGAA GATCATCCGG CGCTTTCGCA GCGAGTATCC GGCCGTCGAG CTGAGCCTGC ACGAGATGTC GACGATGGAC CAGATCAAGG CGCTGAAGGA AGGGCGCATC GACGTCGGGT TCGGACGCAT CCGTCACGAG GATCCGAGCG TGCGGCGCGT CGTGCTGCGC GAGGAACGGA TGATCGTCGC GCTGCCGGTC GGTCACGTGC TCGACGGCGC GAAGCCCGTG CTGTCGCTGC ACGATCTCGT GAACGACACG CTGATCATCT TTCCGAAGGC GCCGCGGCCG AGCTATGCGG ACCAGGTGCT CGCGGCATTC CACGATCGCG CGCTGCAGCC GCGGCGCATC TACGAGACGC GCGAGCTGCA GATCGCGCTC GGGCTCGTCG CGATGGGCGA GGGCGTGTCG GTCGTGCCGC ACAGCGTGTA CGGGCTGAAG CGCGACGACA TCAGCTACAA GCCGCTCGAC GATCCGAACC TCGTGTCGCC GATCATCATG AGCATGCGGA TGCTCGACGA ATCGGAGGAC ATCCGCGCGA TGCAGGCGCT GATCTACCGG CTCTACGACG AGTCGCAGAT GGAGTATCTG CCGCCGCAAC CCGAATGA
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Protein sequence | MELRHLRYFV AVAEERNFTR AAERLHIAQP PLSRQIQQLE EALGVPLFER NARPLKLTDA GRFFYSHAVQ LLAQTTELES MTKRVGKIER SMSVGFVGST LYGMLPKIIR RFRSEYPAVE LSLHEMSTMD QIKALKEGRI DVGFGRIRHE DPSVRRVVLR EERMIVALPV GHVLDGAKPV LSLHDLVNDT LIIFPKAPRP SYADQVLAAF HDRALQPRRI YETRELQIAL GLVAMGEGVS VVPHSVYGLK RDDISYKPLD DPNLVSPIIM SMRMLDESED IRAMQALIYR LYDESQMEYL PPQPE
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