| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3593 |
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| Symbol | |
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| ID | 6180339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 530559 |
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| End bp | 531641 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641683363 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_001810276 |
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| Protein GI | 172062625 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCT ACCGTATCGC GACCATTCCC GGCGACGGCA TCGGCAAGGA AGTGGTGCCG
GCCGGCAAGC AGCTGCTGGA AGCGCTGGCC CGCGGCAGCG ACCGCTTTGC GTTCGAGTTC
GAGGATTTCG ACTGGGGCGC CGATTACTAC CGCCAGCACG GCGCGATGAT GCCGGCCGAC
GGCCTCGACG CGCTGCGCGG CAAGGACGCG ATCCTGTTCG GTTCGGCCGG CGACCCCGAC
GTGCCCGACC ACGTGACGCT GTGGGGCCTG CGCCTGAAGA TTTGCCAGGG CTTCGACCAG
TACGCGAACG TGCGCCCGAC GCGCATCCTG CCCGGCATCG ACGCGCCGCT GAAGCGCTGC
GGGCCGGACG ACCTGAACTG GGTGATCGTG CGCGAGAACT CGGAGGGCGA ATACGCGGGC
GTCGGCGGTC GCGTGCACCA GGGGCATCCG ATCGAGGCCG CGACCGACGT GTCGATCCTC
ACGCGCGCCG GCGTCGAACG CATCATGCGC TTCGCGTTCC GGCTCGCGCA GTCGCGTCCG
CGAAAGCTGC TGACCGTCAT CACGAAGAGC AACGCGCAGC GTCACGCGAT GGTGATGTGG
GACGAGATCG CGAAGCAGGT CGCGCAGGAA TTTCCCGACG TCACGTGGGA CAAGGAACTC
GTCGACGCCG CGACCGCGCG CATGGTGAAC CGCCCGGCGT CGCTCGACAC GATCGTCGCG
ACGAACCTGC ACGCGGACAT CCTCAGCGAT CTCGCCGCCG CGCTCGCCGG CAGCCTTGGC
ATCGCGCCGA CCGGCAACAT CGATCCCGAG CGCCGCTATC CGTCGATGTT CGAGCCGATC
CACGGCTCCG CGTTCGACAT CATGGGCAAG GGCCTCGCGA ATCCGGTCGG CACGTTCTGG
TCGGTCGTGA TGCTGCTCGA GCATCTCGGC GAGACCGAAG CCGCCGCGCG CGTAATGCAG
GCGATCGAGG CCGTCACGGC GGACGCGTCG TTGCATACGC GCGACCTCGG CGGCAGCGCG
ACGACCGCGC AGGTGACGGC CGCCGTCTGC GAGCGCGTCG CGACCGCGGC GGTCACCGCC
TGA
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| Protein sequence | MKTYRIATIP GDGIGKEVVP AGKQLLEALA RGSDRFAFEF EDFDWGADYY RQHGAMMPAD
GLDALRGKDA ILFGSAGDPD VPDHVTLWGL RLKICQGFDQ YANVRPTRIL PGIDAPLKRC
GPDDLNWVIV RENSEGEYAG VGGRVHQGHP IEAATDVSIL TRAGVERIMR FAFRLAQSRP
RKLLTVITKS NAQRHAMVMW DEIAKQVAQE FPDVTWDKEL VDAATARMVN RPASLDTIVA
TNLHADILSD LAAALAGSLG IAPTGNIDPE RRYPSMFEPI HGSAFDIMGK GLANPVGTFW
SVVMLLEHLG ETEAAARVMQ AIEAVTADAS LHTRDLGGSA TTAQVTAAVC ERVATAAVTA
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