Gene BamMC406_3591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3591 
Symbol 
ID6179330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp528828 
End bp529457 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content68% 
IMG OID641683361 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001810274 
Protein GI172062623 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACC TGACCACGCT GACCACCTTC ACGGCCGTCG TTCTGGGCCT GTTCCTGATC 
CCCGGCCCCG CCGTGCTGCT CGTGCTGAGC CGCACCGTGC AGGGCGGCCG CAAGACCGGC
ATCCTGACCG GTCTCGGCGT CGCGAGCGGC GATTTCGTGC ATACGCTGTT CGCGGCCGTC
GGGCTGTCGG CGCTGCTGAT GACGTCGGCG CTCGCGTTCA ACGTCGTGAA GCTGGTCGGC
GCCGCGTACC TGATCTACCT CGGCGTGCGT GCGCTGCTCG ACCGGCCGTC GTCCGATCCG
TCGCTGCCGA AGGTGGCGGC CGTCACGCCG CTGAAGGCGT ACCTGCAGGC GATTCCCGCC
GAAGTGCTGA ACCCGAAGAC CGCGCTGTTC TTCCTCGCGT TCATGCCGCA GTTCGTGCAT
CCGGAACGCG GCTCGACGTT CGTGCAGTTC GCGGTGCTCG GGCTGATCTT CGTCGTGCTG
AGCTCGCTCT ATACGACGCT GATCGCGTGC TCGATCCGCC CGCTCGGGCG CGTCGTGAAG
CGGCTCGCAT GGCTCACGCG CTGGCAGGGG AAAATCATCG GCTCGATCTT CATCGCGCTC
GGGCTGCGCG TCGCGGTGCA GCAGCGCTGA
 
Protein sequence
MFDLTTLTTF TAVVLGLFLI PGPAVLLVLS RTVQGGRKTG ILTGLGVASG DFVHTLFAAV 
GLSALLMTSA LAFNVVKLVG AAYLIYLGVR ALLDRPSSDP SLPKVAAVTP LKAYLQAIPA
EVLNPKTALF FLAFMPQFVH PERGSTFVQF AVLGLIFVVL SSLYTTLIAC SIRPLGRVVK
RLAWLTRWQG KIIGSIFIAL GLRVAVQQR