| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3589 |
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| Symbol | |
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| ID | 6179873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 526411 |
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| End bp | 528027 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641683359 |
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| Product | regulator of RNA terminal phosphate cyclase |
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| Protein accession | YP_001810272 |
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| Protein GI | 172062621 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4650] Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.858048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGA CCGTCGCCAT CGGCTTTCTC GGCACCGTGC TCGATCAGGG CGGCCGCGCG
CCGCGCCGTT ACCGCAAGTG GCGGCCGACC GTGTCGCTCT GCATGCAGCC GGACTTCGCG
ATCGACCGGC TCGAGCTGCT GCATCCGCCG GGCCACACGC GCCTCGCCAA TCAGGTGCGC
GACGATCTCG CGCATCTGTC GCCGGATACC GAGGTGCGGC TCACGCCGGT CACGATCCGC
GATCCGTGGG ATTTCGAGGA GGTCTACGCG ACGCTGCACG ACTTCGCGCG CGCCTATCCG
TTCGATCTGG ACCGCGAGGA CTACCTGGTC CACATCACGA CGGGCACGCA CGTCGCGCAG
ATCTGCTGGT TCCTGCTCGC GGAAGCGCGC TACCTGCCCG CGCGCCTCGT ACAGACGGGG
CCGCCGAAGC AGACCGACGA AGGGTCGAGC GGCCCCGGCA CGGTGTCGGT GATCGATCTC
GACTTGTCGC GCTACAACCG GATCGCGCAG CGCTTCACGC GCGAGCGCGA CGAAACGGTG
TCGTTCCTGA AGGCCGGCAT CGCGACACGC AACGCGCGTT TCAACGCGCT GATCGAGCAA
CTGGAGCGCG TGGCCGTGCG CTCACGCGCG CCGATGCTGC TCGTCGGGCC GACGGGCGCC
GGCAAGTCGT TTCTCGCGAA GCGCGTGTAC GAACTGAAGC GCGGCCGCCA TCGGCTCGCG
GGGCCGTTCA TCGAGATCAA TTGCGCGACG CTGCGCGGTG ATGCGGCGAT GTCGACGCTG
TTCGGTCACG TGAAGGGAGC GTTCACGGGC GCGCAGTCCG CGCGTGCGGG CTTGCTGCGC
GCGGCGGACG GCGGCCTGCT GTTTCTCGAC GAGATCGGCG AACTCGGGCT CGACGAGCAA
GCGATGCTGC TGAAGGCGAT CGAGGAGAAG CGCTTCCTGC CGGTCGGCGC GGACGTCGAG
GCGACCAGCG ATTTCGAGCT GATCGCCGGC ACGCATCGCG ACCTGCGGCA GATGGTGGCG
GCCGGCACGT TCCGCGAGGA TCTGTATGCG CGGATCAATC TGTGGACGTA TGAATTGCCG
GGACTGGCCG AGCGTCGCGA GGACATCGAG CCGAACCTCG AATTCGAGCT CGATCGATTC
GGCCGCGAGC AGGGCGAGCA GGTGCGGTTC AACGTGGAAG CGAAGCGACG CTATCTCGCG
TTTGCGGCGT CGCCGCGCGC GGCATGGGCC GGCAACTTCC GCGAGCTGTC CGCATCGATC
ACGCGGATGG CGACGCTCGC CGATGCAGGG CGGATTACCG AGGCGATTGC CGAACAGGAG
GTCGAGCGGC TGACGCGCAC GTGGTCGTCA CCGGGCGGCG CGGGCGCGTC GGATGGCTAC
GTCGACGCCG TGTTCGGAAC GCGTGCGGCG GAACTCGACC TGTTCGACCG CGCGCAGCTC
GAACGCGTGC TCGACGTGTG CCGCGTGTCG GCAAGCCTGT CGGAGGCTGG GCGCACGCTG
TTCGCGGTAT CGCGGCAGAA CAAGAAGCAG CCGAACGATG CGGACCGGCT GCGCAAGTAT
CTCGCGCGGT TCGGGCTGGA TTGGGACGGT GTGCGGCAGG TGCTGGACGC GAGGTAG
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| Protein sequence | MRKTVAIGFL GTVLDQGGRA PRRYRKWRPT VSLCMQPDFA IDRLELLHPP GHTRLANQVR
DDLAHLSPDT EVRLTPVTIR DPWDFEEVYA TLHDFARAYP FDLDREDYLV HITTGTHVAQ
ICWFLLAEAR YLPARLVQTG PPKQTDEGSS GPGTVSVIDL DLSRYNRIAQ RFTRERDETV
SFLKAGIATR NARFNALIEQ LERVAVRSRA PMLLVGPTGA GKSFLAKRVY ELKRGRHRLA
GPFIEINCAT LRGDAAMSTL FGHVKGAFTG AQSARAGLLR AADGGLLFLD EIGELGLDEQ
AMLLKAIEEK RFLPVGADVE ATSDFELIAG THRDLRQMVA AGTFREDLYA RINLWTYELP
GLAERREDIE PNLEFELDRF GREQGEQVRF NVEAKRRYLA FAASPRAAWA GNFRELSASI
TRMATLADAG RITEAIAEQE VERLTRTWSS PGGAGASDGY VDAVFGTRAA ELDLFDRAQL
ERVLDVCRVS ASLSEAGRTL FAVSRQNKKQ PNDADRLRKY LARFGLDWDG VRQVLDAR
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