Gene BamMC406_3581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3581 
Symbol 
ID6181161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp517715 
End bp518317 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content59% 
IMG OID641683350 
ProductTetR family transcriptional regulator 
Protein accessionYP_001810264 
Protein GI172062613 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.919672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.194712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGC TGGGCAAAAA AGGCGCGGCT ACCCGCGAGG CGATCCTCGC ATCCGCGCGA 
CAGGCATTTA CGCAATCGGG CTACGATGTC GGTGTACGCG AGATCGCTGA GAACGCGGGA
GTCACCGCGA TGCTCGTGAA TCGTTATTTC GGGTCCAAGG AACAGCTGTT CGAGGAGGTA
GTCGACCTGG TTCTTTCGGC TCCGGGCATC CTCACGCGGG AAGTGATGAC GAACGCGTCT
GACGTATCGA CGCTATGCCG CGATGTTGCT GCCGCGCTTG TGGCGAAGAC GGCACCGGAC
ATCACGTCGA TGGACGGGTT TCTCATCATG CTGCGATCGG CCAACAATGA GCAGGCCACA
GCCATTCTGC GCAGGAAGTT TGAAACGCAC TTTGCCCGAC CGTTATCTGA GCTGCTGCCC
GGCGAAGAAA CCTCGCAGCG GGCCGCGATG TTTCTAGCCG TCATTGCCGG CTTCCAAGTC
ATGCGACAGG TCGTCGAGAT GGCCGCATTG GCGCAAGCCA AACCGGATCA GTTGGAGCGA
CAACTAGAGG CGCTCTTCGG GTTGCTGATT ATCGGAACTC CGATCAAGCA CTTGACTGGC
TGA
 
Protein sequence
MKTLGKKGAA TREAILASAR QAFTQSGYDV GVREIAENAG VTAMLVNRYF GSKEQLFEEV 
VDLVLSAPGI LTREVMTNAS DVSTLCRDVA AALVAKTAPD ITSMDGFLIM LRSANNEQAT
AILRRKFETH FARPLSELLP GEETSQRAAM FLAVIAGFQV MRQVVEMAAL AQAKPDQLER
QLEALFGLLI IGTPIKHLTG