| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3576 |
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| Symbol | |
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| ID | 6181331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 512370 |
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| End bp | 514601 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641683345 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001810259 |
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| Protein GI | 172062608 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0391438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTGA ATAGAACAAC AGCGTCGCCC GCACGGCGGC GGCGCGCGAA GGTCGGCGTG
GGCGTCGGTC TCGGCATCAC GCTTTTCGCG GCGCAGGCCG CCGCGGCACA GGGCGACGCG
CCGGCTCCCG AAGCCGATGC GGCCGCCAGC GCGACGCTGC CGGCGATCGC GGTCAGCGGC
GAGCGCGGCG GCGCGTTTCG CGCGCGCGAA GCGTCGGTCG CGGGGCTCGA CGACGCGCCG
CTGCGCGACA CGCCGGCCTC CGTCAGCGTC GTCACGCGCG CGCAGCTCGA CGACCAGCAG
GCCAAGCGCC TGAGCGACGT GGTGCGCAAC GATGCGTCGG TCGTCAACGA CTACGCGCCC
GTCGGCTACT TCGAAGGCTT CGCGATTCGC GGCTTCCCGG TGGATCTCGC GAGCGCGATC
CGGATCGACG GGCTGACGGT GTCCGGTGAG CAGAACGTGC CGCTCGAGAA CAAGGAGCGC
GTCGAAATCC TGAAGGGACT GGCCGGCATC GACAGCGGCG TGGTCGCGCC GGGCGGCGTG
ATCAACTTCG TGACGAAGCG CTCGGCAAAC GTCGCGAGCG TGACGACCGG CGTCGACAGC
CGCGGCTCGA CGTCGGCGGC CGTCGATCTC GGCCGTCGCT TCGGCCCCGG CCGCCAGTTC
GGATTCCGGA TCAATGCCGC GAAGGAGAAC ATGCACTCGT ACATCGACGG CACGAACGGA
CGGCGCACGT TCGGCTCGAT CGCCGCCGAC TGGGACATCA GCCCGCGCGC GAGCCTGCAG
TTCAACGCCG AATTCCAGCA GTGGATCCAG CGTTCCGCAC CCGGCTACCA GCTGCTCGGC
GGCACCGTCG TACCGTCCGT CAACACGACG TCGAAGGCGC TCGGCACGCA GCCGTGGGCG
AAGCCGGTGA CGACCGACGC GCTGAACCTG AACGCGCGCT TCGACTACCG GTTCAACGAC
GACTGGAACG CCTACATCGC CGCGGGCCGC AGTCGCACGA TGATCGACGA CAACAGCGCG
TTCGCGTACG GCTGCTATTA CGCGCCGAGC TGCGCGGCCG GCCCGACGTC GCCGTTCTTC
TTCGGCGCGA ACGGCGACTA CGACGTGTAC GACTTCCGCA GCCCCGGCGA ATACCGCCGC
AACGACGACC TGCGCGCGGT GACGACGGGC AAGTTCGCGA CGGGCTCGCT GCGCCACGAG
CTGACGCTCG GCGTGAGCGT GCAGCGCCGC GTCGTGCACA TGGCGAACGC CGTGTACGAC
TACGTCGGCA GCGAGAACAT CTACGGGCCC GACGTCGCAT TCGCGCCGTC GCCGAACACG
GCCGGGCCGT CGTATCCGCA GCTCGATTCC TGGCAGTACG GCGTGTTCGG GCTCGATCGC
ATCAGCATCG GCGAGCATTG GCAGGTGCTC GCCGGCGGCA AGGAAGTGCT GCTGCGCCAG
CGCAGCTGGA GCAGCCTCGA CGGCGACGCG ACGCACACCG ACCGCTCGGT GTTCCTGCCG
CAGGTCGCGC TCGTCTACAA GCCGGTGAAC GTGCTGTCGC TGTATGCGTC GTACAGCAAG
GCGCTGTCGC TCGGCGACCA GGCGCCGGTA CGCGCGACCA ACGCGTATGC GTTCCTGCCG
CCGGTCGAAT CGCACCAGTT CGAGCTCGGC GCGAAATACG ACTGGCTCGA CCGGCTCAGC
CTGACGGCCG CCGTGTTCTC GATCAGCAAG CCGTTCCAGT TCGCCGACCC CGATGCGTCC
GGCACGAGCT ATACGTTCGT GCAGCGCGGC ACGCAGCGCC ATCAGGGGAT CGAGCTCGGC
GCGGCCGGGC GGCTCACCGA GCGGCTGTCG TTGACGGCCA GCGTCGCGGC GATTCGCGCG
CGTGCGTACG ATTCGGGTTC GCCGGCGTAC GAAGGGCACC AGATCATCAA CGTGCCGGCG
CTGCGCGCGT CGCTGTACGC GGATTACGCG GTGCCGGGCG TCGCGGGCCT GAACATGCTG
GGCGGCGTCG AGTACAGCGG GGGCCGCAAC GCGAACGAAG AGGGCACCGC GCGCGTGCCG
TCGTGGTTCG TGTTCAATCT CGGCGCGCGC TATACGACGA AGATCGGCGG CCATCGAGCG
GTGCTGCGCG TGTCGGTGGA CAACCTGTTC AACAAGTTCT ACTGGCGCGA CGCGGGCGAG
CAGCAGGGCG ACGCGTACCT GTTCCCGGGC GCGCCGCGCA CCGCGCGCGT GTCGCTGACC
TATGATTTCT GA
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| Protein sequence | MTVNRTTASP ARRRRAKVGV GVGLGITLFA AQAAAAQGDA PAPEADAAAS ATLPAIAVSG
ERGGAFRARE ASVAGLDDAP LRDTPASVSV VTRAQLDDQQ AKRLSDVVRN DASVVNDYAP
VGYFEGFAIR GFPVDLASAI RIDGLTVSGE QNVPLENKER VEILKGLAGI DSGVVAPGGV
INFVTKRSAN VASVTTGVDS RGSTSAAVDL GRRFGPGRQF GFRINAAKEN MHSYIDGTNG
RRTFGSIAAD WDISPRASLQ FNAEFQQWIQ RSAPGYQLLG GTVVPSVNTT SKALGTQPWA
KPVTTDALNL NARFDYRFND DWNAYIAAGR SRTMIDDNSA FAYGCYYAPS CAAGPTSPFF
FGANGDYDVY DFRSPGEYRR NDDLRAVTTG KFATGSLRHE LTLGVSVQRR VVHMANAVYD
YVGSENIYGP DVAFAPSPNT AGPSYPQLDS WQYGVFGLDR ISIGEHWQVL AGGKEVLLRQ
RSWSSLDGDA THTDRSVFLP QVALVYKPVN VLSLYASYSK ALSLGDQAPV RATNAYAFLP
PVESHQFELG AKYDWLDRLS LTAAVFSISK PFQFADPDAS GTSYTFVQRG TQRHQGIELG
AAGRLTERLS LTASVAAIRA RAYDSGSPAY EGHQIINVPA LRASLYADYA VPGVAGLNML
GGVEYSGGRN ANEEGTARVP SWFVFNLGAR YTTKIGGHRA VLRVSVDNLF NKFYWRDAGE
QQGDAYLFPG APRTARVSLT YDF
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