| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3572 |
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| Symbol | |
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| ID | 6179441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 507760 |
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| End bp | 508698 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641683341 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001810255 |
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| Protein GI | 172062604 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.439946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00313021 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCGATC TGCGCGACGT GAACCTGAAC CGGCTGGCGA TCTTCGTCGC GGTGGTCGAT
GCCGGCTCGC TGACGGCCGC GGCCGAGCGG CTCGGCCTCG CGAAGACGGT CGTCAGCACG
CACATGCAGC GCCTCGAATC CGAAGTCGGC GCGAACCTGC TGGTCCGCAC CACGCGGCGG
CTGAGCGTGA CCGATGCGGG GCGCGCGTTC TACGACGCGT GCCGCGACAT CGTGCGCGCG
ACCGAAAGCG CGCTCGACGC GGTGTCGTCC GACGCGGGTC CATTGCGCGG CACGCTGCGC
GTGAGCGTGC CGATCGACTA CGGCGCGCTG GTCGTCGCGC CGGCCATCGT CGCGCTGCGC
GATGCGCATC CGGGGCTCGA TGTCGAACTG ATCGCGAACG ACCGCGTCGT CGATCTGGTC
GCGGACAACC TCGACGTCGC GATCCGCCTC GGCCGCCTCG CGGATTCGAA CCATCGCGCG
GTGCAGCTGG GTCAATACGA GAAATGGGTG GTGGCGAGCC CCGCGTTCGT CGCACGGCAT
GGCCTGCCGC GCGATCCGGA TGCGCTCGCC GCGCTGCCGT TCGTGATGCT GTCGACACCG
TCACGCCCGC ATACGCTCGA ACTCGACGAT ACGAGCGGCG GCCATGCGTC GGTGCGCTGC
ACCGCGCCGG TCGTGTCGAA CACCGCGACG GCCTGCCGCG CGATCGCGCT CGCGGGCGGC
GGCTTCGGGT TCCTGACGGA TTTCTCGACC GCGGAGGACA TCGCGGCCGG CCGGCTCGTC
CGGCTGCTGC CCGCCTGGCG CTCGGCGCGG GCGGGGATTC ATGCGGTGTA TCCGTCGACG
CGGTTGCCGT CGCAAAAGGT GCGCGCGTTC ATCGACGCGA TGAAGGCGCG GATCGCGGCA
ACCGCGCCGC CGGCAACGGA TTTTCTCGCG CCGAATTAA
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| Protein sequence | MADLRDVNLN RLAIFVAVVD AGSLTAAAER LGLAKTVVST HMQRLESEVG ANLLVRTTRR
LSVTDAGRAF YDACRDIVRA TESALDAVSS DAGPLRGTLR VSVPIDYGAL VVAPAIVALR
DAHPGLDVEL IANDRVVDLV ADNLDVAIRL GRLADSNHRA VQLGQYEKWV VASPAFVARH
GLPRDPDALA ALPFVMLSTP SRPHTLELDD TSGGHASVRC TAPVVSNTAT ACRAIALAGG
GFGFLTDFST AEDIAAGRLV RLLPAWRSAR AGIHAVYPST RLPSQKVRAF IDAMKARIAA
TAPPATDFLA PN
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