Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3567 |
Symbol | |
ID | 6180176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 502917 |
End bp | 503903 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641683336 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001810250 |
Protein GI | 172062599 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.253365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00645223 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCATA CGCTTCATCT GATCCAGAAC GTGCTGCTCG GCGTCGTCGT GGTGCTCGCC GTGCTCGCGC TGTTTTCCGG CTTCGTCGCG CGCCGCGTGA CGCGCGCGTT TCCGCCCGAA GGCCGCTTCG TCGACGTCGG CGGCGACCGC ATCCATTACG TCGAGTACGG CAGCGGGCCG CCCCTGGTGT TCGTGCACGG GCTCGCCGGG CAGTGGCGCA ACTTCGCGTA CCTGCCGCTC ACGCGGCTCG CGCAGCACCA TCGCGTGATC CTCGTCGACC GGCCCGGCGC CGGCCGCTCG CTGCGCGGCG CCAGCTCGCA GGCGAACGTG TTCGCGCAGG CCCGCACGAT CGCCGCGTTC CTCGACGCGC TGAAGCTCGA CCGGACGGTG CTCGTCGGCC ACTCGCTCGG CGGCGCGATC GCGCTCGCGG TCGGCCTCAA CCATCCGGAG CGCGTGAGCC GGCTCGCGCT GATCGCGCCG CTGTCGCACG ACCAGACCGA GCCGCCGGCG CCGTTCAAGC CGCTGATGCT GCCGTCGCCG CTGGTGCGCC GCTTCGTGTC GTGGACCTTC GCGGTGCCGC TGACGATCCT GACCGGCCGC AAGGCCGTCG ACCAGGTGTT CGCGCCGGAA GCCGTGCCGC GCGACTTCCC GGTAAAGGGC GGCGGTTTGC TCGGGCTGCG GCCACACGTG TTCTACGCGA CGGCGACGGA CCTGCTGTCG GCGCCCGTCG ACCTGCCCGC GATGGAGCGA CGTTACGGGG ATCTCACGCT GCCGGTCGAC GTGCTGTACG GCCGCGCCGA TCCGATCCTG AACTGGCGCG TGCACGGCGA GGCGCTGGCG AGCAAGTCGG CGCGCGTGCG GCTGACGGTC GTCGAAGGCG GACACATGCT GCCCGTCACG ATTCCGGACG CGACCGCGGA CTGGCTACTC AAGGTTGCCG CCGCGCCGAT CGACGTGCCG GCGCAGGGTG CGCACGTCGA GCATTGA
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Protein sequence | MSHTLHLIQN VLLGVVVVLA VLALFSGFVA RRVTRAFPPE GRFVDVGGDR IHYVEYGSGP PLVFVHGLAG QWRNFAYLPL TRLAQHHRVI LVDRPGAGRS LRGASSQANV FAQARTIAAF LDALKLDRTV LVGHSLGGAI ALAVGLNHPE RVSRLALIAP LSHDQTEPPA PFKPLMLPSP LVRRFVSWTF AVPLTILTGR KAVDQVFAPE AVPRDFPVKG GGLLGLRPHV FYATATDLLS APVDLPAMER RYGDLTLPVD VLYGRADPIL NWRVHGEALA SKSARVRLTV VEGGHMLPVT IPDATADWLL KVAAAPIDVP AQGAHVEH
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