Gene BamMC406_3560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3560 
Symbol 
ID6180855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp495350 
End bp495994 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content70% 
IMG OID641683329 
Producthypothetical protein 
Protein accessionYP_001810243 
Protein GI172062592 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.227578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.135596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGACG AAATCGACGA CGGCGCGTCT GCCGCGCCGG TGTGGCCCGC GTTCGCCGAC 
CTGATGTCGG TGCTGCTCGG TGCGTTCGTG CTGATTCTCG TCGGCGTGAT CGGCATGCAG
TTGCAGCTCA CGTCGAAGCT CGAGGAAGCC GTGCGTGCGC GCCAGCAGGA GGCGCAGCAG
CGCAAGTCGC TCGAACAGGC GCTCGCCGGG CCGCTCGCGG CCGGCCGCGT GACGCTCGTG
AACGGCCGTA TCGGCATCAG CGGCGCGGTG CTGTTCGCGC TGAACTCCGA CCAGTTGCAG
CCCGACGGCC GCGATCTGCT GAAGACGCTG GCCGGGCCGC TGGCCGCCTA CCTGACGACG
CGCGACGAGA TCCTGATGAT CAGCGGCTTC GCCGACGACC AGCAGGTGCG TGCCGGCAAC
CGCCAGTTCG CGGACAACTG GGAGCTGTCG GCCAAGCGCG CGCTAACGGT CACGCGGGCG
CTGATCGACG CCGGCGTGCC GGCGCGGTCG GTGTTCGCGG CCGCGTTCGG TTCCGAGCAG
CCGGTCAGCT CGAATGCGGA CGACGAAGGC CGCGCGAAGA ACCGTCGCGT GGAGATCGCA
CCGGTGCCGC GCAAGTCCGC ATCGAACGGA GGGAAGCCGA AGTGA
 
Protein sequence
MHDEIDDGAS AAPVWPAFAD LMSVLLGAFV LILVGVIGMQ LQLTSKLEEA VRARQQEAQQ 
RKSLEQALAG PLAAGRVTLV NGRIGISGAV LFALNSDQLQ PDGRDLLKTL AGPLAAYLTT
RDEILMISGF ADDQQVRAGN RQFADNWELS AKRALTVTRA LIDAGVPARS VFAAAFGSEQ
PVSSNADDEG RAKNRRVEIA PVPRKSASNG GKPK