| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3552 |
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| Symbol | |
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| ID | 6180658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 484009 |
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| End bp | 485295 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641683321 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001810235 |
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| Protein GI | 172062584 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.313254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGTTG CTGCAACGAG ACGGAGCATA GTCCGCGGAG AGCGCCCTAT AATTCACCTC
AATTCATTTC ATTTTTTACC CAAAGTGAGA ACTGATTCGA CCTCCGACTT CGAGTTCTTC
GTCCAGCTCG CCAAACTGAA GAGCCTGTCG GGCGCGGCCC GCTCGCTCGG GATCACACCG
CCCGCGGCAA CCAAGCGGCT CGGCATTCTC GAAGACCGGT TCGGCAAGCG GCTGGTCAAC
CGGACCACCC GCAGCGTCAG CCTGACGCCG GAAGGCGAGA TGTACGCGCG GTACGCCACG
CAGATTCTCG ACCAGGTGCG CGAGATGGAG GACGCGATCG CAGGCACGCC CGCGGACCCG
CACGGGCGGC TGCGCATCAA TGCGACGCTC GGTTTCGGGC GCACGACCAT CGCACCGCTG
GTGTCGGAAT TCGCGAAGCG CTATCCGAAC GTCGATGTCC AGTTCGTGGT CACCGATCGC
CCGGTCGACC TCGTCGAAGG CGCATTCGAC ATGGCCATCC GGTTCGGCGA GTTGCCGGAC
CAGCGCTTGA GGGCGCGCCG CCTGATGAGC AATCGCCGGT TCCTGTGCGC GTCGCCGAAG
TATCTCGAGC GCAACGGCGT GCCGCAGTGC AAGGAGGATC TCGCGCATCA CCGCTGCATC
ATCCACACGC AGAACGACGA TGCGTTCGGC GTGTGGCGCT TCATGCAGGA GGATCACCTC
GAAGCGCTGA AGGTGAGCGG CTCGCTGTCC AGCAACGACG GCGACATCGT GCTGCGCTGG
GCGCTGGGCG CTGGACGGTC ACGGCATCCT GATCCGCTCG GAGTGGGATC TCGCCAAATA
CATCCAGAGC GGCCGACTCC GTCTCGTGCT GCCCGACGTC GTCCTGCCGT TCGCCGACCT
GTTCGTCTAC TATCCCGGGC AACGCAACGA ATCGACGCGG GCCCGCGCGT TCATCGACTT
TCTCGTCAAG CACTTCGAGG CACCGTTCGT TCCGGTCGAC GTAGCCAACG CGGCGCCGGA
CCGCAAGCGA TCCGCTCGAG CGAAGCGTTG ACACCGCACC GGCTCCGGGC CCTTCGGGCC
GCGGCCGGTC GATGCAGGGA CACATCACGG AGCCGCGTTG CCACGGGGCG GGAAGCCGCC
AGCCCGGCCG GGAATGAAGC ATGTTCCGTC TCGCGCGCAT CCATGCAACT CGCACGCCCG
CGCCAACCGG TCTACCATAG GCGCTCGTCG CCGTTCAGGC GCGCGCCGGC GCGGCATGCG
GCTTGCGCGC CGCCCTTCCC ACGTTGA
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| Protein sequence | MHVAATRRSI VRGERPIIHL NSFHFLPKVR TDSTSDFEFF VQLAKLKSLS GAARSLGITP
PAATKRLGIL EDRFGKRLVN RTTRSVSLTP EGEMYARYAT QILDQVREME DAIAGTPADP
HGRLRINATL GFGRTTIAPL VSEFAKRYPN VDVQFVVTDR PVDLVEGAFD MAIRFGELPD
QRLRARRLMS NRRFLCASPK YLERNGVPQC KEDLAHHRCI IHTQNDDAFG VWRFMQEDHL
EALKVSGSLS SNDGDIVLRW ALGAGRSRHP DPLGVGSRQI HPERPTPSRA ARRRPAVRRP
VRLLSRATQR IDAGPRVHRL SRQALRGTVR SGRRSQRGAG PQAIRSSEAL TPHRLRALRA
AAGRCRDTSR SRVATGREAA SPAGNEACSV SRASMQLARP RQPVYHRRSS PFRRAPARHA
ACAPPFPR
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