| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3540 |
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| Symbol | |
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| ID | 6180507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 470572 |
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| End bp | 471552 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641683309 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001810223 |
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| Protein GI | 172062572 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAGC CTACCCGCCC GCTACCCGCC GACGGCGCGA CGGCCGGCCT CGCACCGCCT
ACCGCCCCGG GCGATGCGGT GACGCCGCGC ACCGCCGGCG GCCGCGTGCC GCGCGCCACG
TGGCGCGCCC ATGCGCCGCT GTGGCTGATG TGCGCGCCCG CGTTCGCGCT GTTCGCCGCG
CTCGTGCTCG TGCCGCTCGC GATGACCTTC GCGCTCACGT TCTACCGCTT CGACCCGGCC
ACCGGCCCGA TCGCCGCGTT CCAGTTCGGC CACTACGCGG AGGTGCTCGG CTCGTCGTAC
TTCCACACGA TCTTCGCGCG CACCTTCGGC ATCGCCGCGC TGACCACCGC GATCTGCGTC
GCGATCGGCA CGCCGGAAGC GTACGTGCTG TCGAAAATGC GCGACCCGTG GCGCTCGCTG
TTCCTGCTCG TGATCCTCGC GCCGCTGCTC GTGTCGGTCG TCGTGCGCGC GTTCGGCTGG
AGCATGCTGC TGAACACGAG CGGGCTCGTG AACCAGGCGC TCGGCCTCGC GGGCCTCGGG
CCGTACAAGC TCGAATACAC GACGTTCGCG ATCGTGATCG CGCTCGTTCA CGTGATGCTG
CCGTTCATGG TGATTCCCGT GTGGACCGCG CTGCAGCGGC TCGATCCGCA GACCGAACAC
GCGGCGCTGT CGCTCGGCGC CTCGCCGTTC ACGACGCTGC GCCGCATCGT GGTGCCGCAG
CTGATGCCGG GCGTGCTGTC GGGCAGCCTG ATGGTGTTCG GGCTGTCGGC GAGCGCCTTC
GCGATTCCGG GCCTGCTCGG CGGGCGCCGC CTGAAGGTCG CGGCGACCGC CGTCTACGAC
GAATTCCTCG GCTCGCTGAA CTGGCCGCTC GGCGCGACGA TCGCGGTGCT GCTGCTGATC
GCGAACCTCG TCGTGATGCT CACCTACTAC CGCGTGCTCG AACGCCGCTA CGCGCGCAGC
CTCGGAGGCG CTTCCCGATG A
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| Protein sequence | MGQPTRPLPA DGATAGLAPP TAPGDAVTPR TAGGRVPRAT WRAHAPLWLM CAPAFALFAA
LVLVPLAMTF ALTFYRFDPA TGPIAAFQFG HYAEVLGSSY FHTIFARTFG IAALTTAICV
AIGTPEAYVL SKMRDPWRSL FLLVILAPLL VSVVVRAFGW SMLLNTSGLV NQALGLAGLG
PYKLEYTTFA IVIALVHVML PFMVIPVWTA LQRLDPQTEH AALSLGASPF TTLRRIVVPQ
LMPGVLSGSL MVFGLSASAF AIPGLLGGRR LKVAATAVYD EFLGSLNWPL GATIAVLLLI
ANLVVMLTYY RVLERRYARS LGGASR
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