| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3535 |
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| Symbol | |
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| ID | 6179789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 465808 |
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| End bp | 466854 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641683304 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001810218 |
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| Protein GI | 172062567 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.472326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.818839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACTGT TCGGAACGAT CGCGGCCGCC GCCGCCCTCT GCATCGCCGG CGCCGCCGCG
CCCGCATTCG CGCAAACGAA GACGATCTAC GTCGGCATGA ACGGCGGGCC GATGGAAAAG
GCCTATACGA GCCAGGTGCT GCCCGAGTTC GAGAAGGCGA ACAACGTGAA GGTCGTCGTC
GTGCCCGGCA CGTCGTCGGA CGTGCTCGCG AAGCTGCTCG CGAACCGCAA CAAGCCGCAG
ATCCACGTCG CGTTCCTCGA CGACGGCGTG ATGGCGCGCG CGGTCAGCCT CGGCGTGTGC
CAGAAGCTCG ACGATTCGCC GGTGCTCAAG GAGCTGTATC CGTTCGCGCG AATGAAGGAC
GACGTCGGCG CGGGCGTGCA GCTCGGAATG ACCGGCATCG CGTACAACAA GAAACTGTTC
ACGGAGAAAG GCTGGGCGCC GCCGACGTCG TGGATGGATT TTGCCGATCC GAAATACAAG
GGCAAGGTCG TGTTCCAGTC CGCGTCGAGC AGCACGTTCG GGCTGCACGG CTTCCTCGCG
ATCAACCGGC TGCTCGGCGG CAGCGAACAG AACGTCGAGC CCGGCTTCAG CAAGTGGGCG
AGCACGGTCG GGCCGAACGT CGTCGAATAC ATCCCGAACT CGGCGAAGAT CTCCGAGATG
GTGCAGACCG GCGAGGCCGG CCTGTTCCCG CTGACGCCGA CCGGCGTCGG CGACCTGCAG
GACAAGGGCA TTCCGGTCGC GTATGCGAAC CCGAAGGAAG GCCCGGTGCT GCTGCTCGTC
GACCTGTGCG TCGTCGCGAA CAATCCGGAT CCGCAGCTGG CGCAGAAGCT CGCGCAGTTC
CTGCTGTCCG CGCCCGCGCA GACGAAGGCC GCCGAAGCCG GCAAGCAGAT CCCGACCAAC
CGCCTCGCGA AGATGCCGGC CGCGATGCAG CAAAGCCTCG GCAACGTCGA CGATCTCGTG
CGCAAGGTGA CGGTGGTCGA CTGGGCGGCG ATCAACGCGC GCCGCGCGCA GTGGGACACG
CGCTGGAACC GGCAGATCGA GCGGTAA
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| Protein sequence | MKLFGTIAAA AALCIAGAAA PAFAQTKTIY VGMNGGPMEK AYTSQVLPEF EKANNVKVVV
VPGTSSDVLA KLLANRNKPQ IHVAFLDDGV MARAVSLGVC QKLDDSPVLK ELYPFARMKD
DVGAGVQLGM TGIAYNKKLF TEKGWAPPTS WMDFADPKYK GKVVFQSASS STFGLHGFLA
INRLLGGSEQ NVEPGFSKWA STVGPNVVEY IPNSAKISEM VQTGEAGLFP LTPTGVGDLQ
DKGIPVAYAN PKEGPVLLLV DLCVVANNPD PQLAQKLAQF LLSAPAQTKA AEAGKQIPTN
RLAKMPAAMQ QSLGNVDDLV RKVTVVDWAA INARRAQWDT RWNRQIER
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