| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3517 |
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| Symbol | |
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| ID | 6181165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 446239 |
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| End bp | 446982 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641683286 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001810200 |
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| Protein GI | 172062549 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0557888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGATC GAGTCGTCCT CGTCACCGGC GCCGCGCGCG GGCTCGGCGC CGTCATCGCC
GAACGCTTCC ATGCGGCCGG CTATCGCGTC GCGCTGGCCG ACATCGCCGC CGACGCCATT
CAAGCGCACG CGCGCGCACT CGACCCGAGC GGCGAACGCG CGATCGCGCT GCCGCTCGAC
GTCACGTCGA AGCGCGACTT CGAAGCCGCG CGCGATGCGC TCGTCGCGCG CTGGGGCACG
ATCGACGTGC TCGTCAACAA TGCCGGCGCG TCGAAGGTCG TGCCCGCGAT GGAGATCACG
GCCGAGCAGT TCGATCAGGT AATCGACGTG AACCTGCGCA GCGTGCTGTT CGGTTGCCAG
GTGTTCGGCC AGTACTTCGC GACGCGCGGC GCGGGCCGCA TCGTCAACAT CGCGTCGCTC
GCCGGGCAGA ACGGCGGCTC TGCGACGGGC GCACACTACG CGGCCGCGAA GGGCGGCACG
CTGACGCTGA CCAAGGTATT CGCGCGCGAT CTCGCCGCGC AGGGTGTGAC CGTCAACGCG
ATCTCGCCGG GTCCGCTCGA CTTGCCGATC GTCTACGAGA GCGTCGCGCC GGAAAAGCTG
CGGCAGGTGC TCGCGAGCCT GCCGGGCGGC AAGCTCGGCT CGGCCGGTTT CGTCGCGGAT
GCGGCGGTGC TGCTCGCGTC GGGCGACGCG CATTTCTCGA ACGGCGCGTG CTGGGACATC
AACGGCGGGT TGTACATGCG TTAA
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| Protein sequence | MSDRVVLVTG AARGLGAVIA ERFHAAGYRV ALADIAADAI QAHARALDPS GERAIALPLD
VTSKRDFEAA RDALVARWGT IDVLVNNAGA SKVVPAMEIT AEQFDQVIDV NLRSVLFGCQ
VFGQYFATRG AGRIVNIASL AGQNGGSATG AHYAAAKGGT LTLTKVFARD LAAQGVTVNA
ISPGPLDLPI VYESVAPEKL RQVLASLPGG KLGSAGFVAD AAVLLASGDA HFSNGACWDI
NGGLYMR
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