| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3506 |
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| Symbol | |
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| ID | 6181145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 436810 |
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| End bp | 438537 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641683275 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001810189 |
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| Protein GI | 172062538 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.145411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0815254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA CTTTCGACTA CATCGTCGTC GGCGGCGGTT CGGGCGGATG CGTCGTCGCA
GGGCGACTGA CCGAGGACCC GGCCGTGACC GTCTGCGTGC TCGAGGCCGG CGGCCGCGGC
GACAACGCGG TCGTCAACGT GCCGACCGGC TCGGTCGCGA TGCTGCCGAC CCGCGTGAAC
AACTGGGCGT TCGACACGGT GCCGCAGCCC GGACTCGGCG GGCGCATCGG CTATCAGCCG
CGCGGCAAGG CGCTCGGCGG TTCGTCCGCG ATCAACGCGA TGGTCTACAT TCGCGGCCAT
CGCGTCGATT ACGACGGCTG GGCCGCGCTC GGCAACGAAG GCTGGTCCTA CGACGACGTG
CTGCCGTACT TCTGCTTGAG CGAGCACAAC GAGCGCTTCG ACGACGCCTT TCACGGCCGC
GACGGCCCGC TGTGGGTCAG CGACCTGCGC ACAGGCAACC CGTTTCATGC GCGCTATCTG
GAAGCCGCGC GGCAGGCCGG CCTGCCGCTC ACCGACGACT TCAACGGTGC GCAGCAGGAA
GGTGTCGGCA TCTATCAGGT CACGCAGAAG CATGGCGAGC GGTGGAGCGC GGCGCGCGCG
TATTTGCTGC CGCACGTCGG CCGGCGCGAC AACCTGACGG TCGAAACGCA CGCGCAGGTG
TTGCGCATCC TGTTCGACGG CACGCGGGCG ACGGGTGTCG AGGTGCGGCA ACACGGCGAA
GTGCGCACGC TGCGCGCGCG GCGCGAAGTC GTGCTCGCGG CCGGCGCGCT GCAGACGCCC
CAGCTGCTGA TGCTGTCGGG TGTCGGTCCG GCCGTCGGAC TGCAGCGACT CGGCATTCCG
GTGCGCGCCG ACCTGCCCGG CGTCGGCCGC AACCTGCAGG ATCATCCTGA CTTCATCCTC
GGCTACCGCA CCCGCAGCGT CGACACGATG GGCGTGTCCG TGCGCGGCGG CCTGCGCATG
CTGTGCGAGT TCGCGCGCTT TCGCCGCGAA CGGCGCGGGA TGCTGACGTC GAATTTCGCG
GAAGGCGGCG GCTTCCTGAA AACGCGGGCC GGCCTCGCTG CGCCCGACAT CCAGCTGCAC
TTCGTCGTCG CGCTCGTCGA CGATCACGCA CGTCGGCTGC ACGTCGGCCA CGGGCTGTCG
TGCCACGTGT GCCTGCTGCG ACCGCGCAGC CGCGGCTCGG TCACGCTGCA TGGCACCGAT
CCGCTCGCCG CGCCGCGCAT CGACCCCGCG TTCTTCGACG ACCCGCGCGA CCTCGACGAC
ATGGTCGCCG GCTTCCGGCT CACGCGCCGG CTGATGGCGG CACCGGCGCT TGCCGAATGG
ATCACCCGCG ACCTGTTCAC CGCGAACGTC ACGACCGACG ACGAGATCCG CGACGTGCTG
CGCCGGCGCA CCGACACCGT GTATCACCCG GTCGGCACCT GCCGCATGGG GCGCGACGCG
CTCGCGGTCG TCGATCCGCA ATTGCGTGTG CACGGCCTGC AGGGGCTGCG CATCGTCGAT
GCGTCGATCA TGCCGACGCT GATCGGCGGC AACACCAACG CGCCGACGAT CATGATCGCC
GAGAAGGCCG TCGACCTGAT CCGCGGCATG CGGCGCGTGC CGGCATGCTC GTCGGCCGAC
ACGGCGCGCG AACCGGCCGC CGCGCCGGCG CACCGCGACC CCGTTTATGC AGCGTGCGTG
TCGCACGATG CGATCCAGCC CGAGGAGATT CGCCATGTCG TCGCCTGA
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| Protein sequence | MSKTFDYIVV GGGSGGCVVA GRLTEDPAVT VCVLEAGGRG DNAVVNVPTG SVAMLPTRVN
NWAFDTVPQP GLGGRIGYQP RGKALGGSSA INAMVYIRGH RVDYDGWAAL GNEGWSYDDV
LPYFCLSEHN ERFDDAFHGR DGPLWVSDLR TGNPFHARYL EAARQAGLPL TDDFNGAQQE
GVGIYQVTQK HGERWSAARA YLLPHVGRRD NLTVETHAQV LRILFDGTRA TGVEVRQHGE
VRTLRARREV VLAAGALQTP QLLMLSGVGP AVGLQRLGIP VRADLPGVGR NLQDHPDFIL
GYRTRSVDTM GVSVRGGLRM LCEFARFRRE RRGMLTSNFA EGGGFLKTRA GLAAPDIQLH
FVVALVDDHA RRLHVGHGLS CHVCLLRPRS RGSVTLHGTD PLAAPRIDPA FFDDPRDLDD
MVAGFRLTRR LMAAPALAEW ITRDLFTANV TTDDEIRDVL RRRTDTVYHP VGTCRMGRDA
LAVVDPQLRV HGLQGLRIVD ASIMPTLIGG NTNAPTIMIA EKAVDLIRGM RRVPACSSAD
TAREPAAAPA HRDPVYAACV SHDAIQPEEI RHVVA
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