Gene BamMC406_3493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3493 
Symbol 
ID6179688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp422482 
End bp422913 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content66% 
IMG OID641683262 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001810176 
Protein GI172062525 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.98557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0180789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACGC TCGACGACGT CGACCGGCAG CTCATCGCGC TGCTGCGCGA CAACGCGCGG 
CTGCCCGTCG TCGCGCTCGC GAAGCAACTG CGCGTCGCGC GCGCGACCGT GCAGAACCGG
CTGACGCGGC TCGAGAAGAA CGGCGTGATC GTCGGCTATA CGGTGCGGCT CAAGCCGGCG
GCCGAGCGGC ACCGGATTCG CGCGCTGATG TCGATCGCGG TGCAGGGCAA TCGCGGCGCG
GAAGTGGTGA AGGTGCTGCG CGGGCATCCG AACGTCGCGT CGATTCACAG TACCAACGGG
CGCTGGGATC TCGTCGCCGA GCTGCATGCC GATTCGCTCG AGCATTTCGA TCGCGTGCTC
GGCGCGATCC GGTTGATCGA CGGGATCGCG AGCACGGAGA CCAGCATTTT GTTGTCGACG
CATAAGGCGT AG
 
Protein sequence
MITLDDVDRQ LIALLRDNAR LPVVALAKQL RVARATVQNR LTRLEKNGVI VGYTVRLKPA 
AERHRIRALM SIAVQGNRGA EVVKVLRGHP NVASIHSTNG RWDLVAELHA DSLEHFDRVL
GAIRLIDGIA STETSILLST HKA