| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3485 |
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| Symbol | |
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| ID | 6179403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 411976 |
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| End bp | 412902 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641683254 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001810168 |
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| Protein GI | 172062517 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.271812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0178536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATC TCGAAGACCT TCGACTCGTC CGCGCGATCG GCGCGTCGCG CTCATTGGCA
TCCGCCGCTC GATTGCTCGA CCTCACCCCG CCCGCCGTCA CGATCCGCCT GCAGCGGATG
GAGGCGCGGC TCGACGTACG CCTTGCCGTG CGACAGCCGA AAGGCATCGC ATTGACCGAC
GAAGGCCAGC GGCTGTATCA GGAAACCGTC GAGATTCTCG AGCGCGTCGA GGCACTGCCG
GTCAACATCT CGGGCGATCA CGGCGACGTG CAGGGCACGC TGCGCGTCGT CGCGCCGTTC
GGCTTCGGAC GCAAGTACGT CGCGCGGATC GTGCGCGACG TGCAGCGCGC GCATCCGAAG
CTCGAGATCT CGCTGCATCT GTCGGAGAGC CCGCTGGGCA GCGCGTCGGG CGCCGACGTG
GTCGTGCATG TCGGCACCCT GAAGTCGTCG TCGTGGATCG GCTATCCGCT CGCACCCAAC
GAGCGCTTCC TGTGCGCGAG CCCCGGTTAC GCGCGTCGCA TCGGCGAACT GAACCATCCG
TCCGACCTCG CCCGCTACGA CTGCCTGTGC CTGCGCGAGA ACGACGAGGA CGTCCCGCGC
TGGCACTTCT CGCAGCCCGG CGACAACAAG GGTGAAGCCA GGCGAACCGC GGTGATCCGC
GTCACGGGCG CGCTTTCGTC GAACGACGGC ACCGTCATCA CCGACTGGGC ACTGGCCGGG
CTCGGCATCG TCGAGCGCTC GGAATGGGAC GTCGCGCCGC TGCTCGCGAA CGGCAAGCTG
GTGCGGCTGC TGCCCGACTG GCATCTGCCG CCCGCGCCGG TGACCGCGCT GCTGCCGTCG
CGCACCGGCC GCTCCGCGCG GCAACGGGTT TTTCTCGACG CCGCGAAGCA ATTTCTCGAT
CCGCCGCCAT GGCGCGGCAA GGCCTGA
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| Protein sequence | MLDLEDLRLV RAIGASRSLA SAARLLDLTP PAVTIRLQRM EARLDVRLAV RQPKGIALTD
EGQRLYQETV EILERVEALP VNISGDHGDV QGTLRVVAPF GFGRKYVARI VRDVQRAHPK
LEISLHLSES PLGSASGADV VVHVGTLKSS SWIGYPLAPN ERFLCASPGY ARRIGELNHP
SDLARYDCLC LRENDEDVPR WHFSQPGDNK GEARRTAVIR VTGALSSNDG TVITDWALAG
LGIVERSEWD VAPLLANGKL VRLLPDWHLP PAPVTALLPS RTGRSARQRV FLDAAKQFLD
PPPWRGKA
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