Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3483 |
Symbol | |
ID | 6179401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 409629 |
End bp | 410600 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641683252 |
Product | ornithine cyclodeaminase |
Protein accession | YP_001810166 |
Protein GI | 172062515 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.738983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0519836 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACAG ACGCTCGACT CCTTCTTCTC GACCGCGACG TGGTCGAACC GGCCCTTCAA GCCGAACAAG TGACGGCGGC CGTGCGCGAG GCCTTCGTGC TGCATAGTCG GCGCGCCGGA CGCGTGTTCC CGGTCGTCCG CGAGAAGCTG CATACCGGCG GGGTATTCGG AATCAAGTCG GGCGACGTCG CGAGCCAGGA TCTGCTCGGT TTCAAGGCGG CCGGGTTCTG GCCCGGCAAT CGCGGCCGCG GCGGCGAACC GCATCAGGCG ACGATCGCGC TGTTCGATCC GGCCACCGGC CGCCCGCTCT GCATCATGGA CGGCAACGCG ATCACCACGG CCCGGACCGG GGCGGCAGGC GGCCTCGGGC TGCAGGCGCT CGCCCGCCGC GACAGCACGC GCATCTGCGT GTTCGGCACC GGCGTGCAGG CGCGCGTCCA GCTCGACTAT GCGATCAGGC TGCTGCCGCA ACGGTGCTCG GTGCAGTACG TGAACGTCAG CGGCAAAGTC GATCCGGCGT TCGAATCGGC ATTTCGCGAA CGCTGCGACA TCCGCGTCGC GCGAGACCGC AACGAGGCGG TGGCCGACAG CGACGTGGTC ATCACGGCGA CACCGGGCGG CGGCCCGCTG TTCGATGCGG ATGCGGTGCA GCCCGGCACG CACCTGACTT GCGTGGGCGC GGATACCGCC GGCAAGCGCG AACTTCCCGA CCGCGTATTG GAGCGTGCGC GGATTTTCGT GGACGATCAC GAGCAGGCGC GCAGCATCGG CGAGTGTCAG TGGGCGCCGG ATTTGCCGCG CACTGAAATC GGCGACGTGC TTTCCGGGGC TGTGTCGGTC GATCGCGCAG CGAGCGAGAT CACCGTGTTC GACATGACGG GGCTCGCACT ACAGGACCTG ACCGTCGCGC GTTTCCTGTA TCGGCACGCT GTCGAGCGCG GCGCGGGGCG CGCCATCCCG TGGCCGTGGT GA
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Protein sequence | MPTDARLLLL DRDVVEPALQ AEQVTAAVRE AFVLHSRRAG RVFPVVREKL HTGGVFGIKS GDVASQDLLG FKAAGFWPGN RGRGGEPHQA TIALFDPATG RPLCIMDGNA ITTARTGAAG GLGLQALARR DSTRICVFGT GVQARVQLDY AIRLLPQRCS VQYVNVSGKV DPAFESAFRE RCDIRVARDR NEAVADSDVV ITATPGGGPL FDADAVQPGT HLTCVGADTA GKRELPDRVL ERARIFVDDH EQARSIGECQ WAPDLPRTEI GDVLSGAVSV DRAASEITVF DMTGLALQDL TVARFLYRHA VERGAGRAIP WPW
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