| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3482 |
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| Symbol | |
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| ID | 6179491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 408877 |
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| End bp | 409599 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641683251 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001810165 |
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| Protein GI | 172062514 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.894604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0749599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCTGA ACAACGTTTC CGCCATCTCG TTCGATCTCG ACGACACGCT GTGGCCGTTC
GGACCCTCCG TCGAACGGGC CGAGGCGTCG CTGCATGCGT GGCTGCTCGC GCACGCGCCC
GAAACCGCGC ACGTGCTGCC CACGTCGCAG GCACTGAACC AGTTGCGCGA CGAATACGAA
CGCTTGCGGC CGGATCTCGT CGGCGACTAT CGTGCGTTGC GCATCGGCTC GATCCGGCTT
GCGCTGGAAC GCGCGAACGA AGACGTCACG CTGACCGAGC GCGCATACGA CGTGTTCTAT
TCCGCGCGGA ACCAGGTCGA GTTCTTCGAC GATGCATTGC CGGCGCTCGC GTGGCTGAGC
GCGCGCTTTC CGCTGATCGC GGTGACGAAC GGCAATGCGG ACCTTCGGCT GACGGGCGGC
GGCGAGTTCT TCCGCGACAC GCTCAGCGCG CGTGCGTTCG GCTTCGCGAA ACCCGAGCCG
GAGATCTTTC ATGCGGCCGC CGCGACGGTC GGCGTGCCCG CGGGGGAACT GCTTCATGTC
GGGGATGATT ACCACCTCGA TGTCGTCGGC GCGTTGAATG CGGGGCTTCA GGCGGCTTGG
GTGGTGCGCG ACACGCATCC GGACGGGGAA CACGTTCGGC AACGAGCGCC TTCCGCACAT
CTCACGCTGC ATGACTTGTC GATGCTTTGT CGAGCGCTCG GCGGGTCCGG CGAGGTGTCG
TAG
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| Protein sequence | MHLNNVSAIS FDLDDTLWPF GPSVERAEAS LHAWLLAHAP ETAHVLPTSQ ALNQLRDEYE
RLRPDLVGDY RALRIGSIRL ALERANEDVT LTERAYDVFY SARNQVEFFD DALPALAWLS
ARFPLIAVTN GNADLRLTGG GEFFRDTLSA RAFGFAKPEP EIFHAAAATV GVPAGELLHV
GDDYHLDVVG ALNAGLQAAW VVRDTHPDGE HVRQRAPSAH LTLHDLSMLC RALGGSGEVS
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