Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3473 |
Symbol | |
ID | 6180812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 395379 |
End bp | 396146 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641683242 |
Product | PEP phosphonomutase |
Protein accession | YP_001810156 |
Protein GI | 172062505 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0613154 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCGCA ATAACAAGGA AAAAGCCGCG TATTTCCGTT CGCTTCATCG CGCGGGCGAG CCGCTCGCGC TGTTCAACGT GTGGGACGCG GGCAGCGCAC GCACGGTGGC CGAGGCGGGT GGCGTCGCGC TGGCGACGGG CAGCTGGTCG GTCGCGGTCG CCAACGGGTT CGCCGACGGC GAGCAGATGC CGAAAGCGCT CGTGATGGAA GTGCTCGCGC GGATCGCGCA AGCGACCGAC CTGCCCGTCA CCGTCGATCT CGAAAGCGGG TACGGCGAGC GGCTGGAGGA CGTGGCCGAC ACGATCGCGC GCAGCATCGA GGCCGGCGCG ATCGGCTGCA ATCTGGAAGA CAGCTTTCCG GCGACGGGCG AACTGCGTAC CGTCGACGAC GCGGCCGCGC GTCTTGCGGC AGCCCGGCAG GCGGCCGATC GCGCGGACAT CGGCTACTTC ATCAACGCGC GCACCGACGT GTTCTTCAAG GCCGCGGCCG ACACGCATGA CGAACGGCTT CTGGACGACG TGCTGACCCG CGCACGCGCG TACGCGGCGG CGGGCGCCGA CGGCCTGTTC GTGCCGGGCC TGCGCTCGCC GGCGCTGATT CGCGCGCTGA CGGCCGCGTC GCCGTTGCCC GTGAACATCA TGCGCGTGGC CGAAACGCCG ACGCTCGCCG AACTCGCGGA ATACGGCGTC GCGCGCATCA GTCACGGGCC CTACCCTTAC CTGGAGGCGA TGAAGGCGCT TGCGGCGGTG GTGAAGCAAG GCGGCTAG
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Protein sequence | MSRNNKEKAA YFRSLHRAGE PLALFNVWDA GSARTVAEAG GVALATGSWS VAVANGFADG EQMPKALVME VLARIAQATD LPVTVDLESG YGERLEDVAD TIARSIEAGA IGCNLEDSFP ATGELRTVDD AAARLAAARQ AADRADIGYF INARTDVFFK AAADTHDERL LDDVLTRARA YAAAGADGLF VPGLRSPALI RALTAASPLP VNIMRVAETP TLAELAEYGV ARISHGPYPY LEAMKALAAV VKQGG
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