| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3449 |
|---|
| Symbol | |
|---|
| ID | 6179434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 367651 |
|---|
| End bp | 369054 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641683218 |
|---|
| Product | amidase |
|---|
| Protein accession | YP_001810132 |
|---|
| Protein GI | 172062481 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACAGC AACTCTGGCA ACTGTCGGCG ACTGAAATCG CGAAGCGGGT GCGGCAACGT
GAAGTGTCCG CGCGGGAAGT GGCGGATGCG ACGCTGGCCC GTCTCGACGC GGTGAACCCG
GCGATCAACG CGGTGGTCGA GCATCGCCCG GACGACGTGC GGCGCCAAGC CGACGAAGTC
GATCGCGCGA TCGCGCGCGG CGACGATCCG GGGCCGCTCG CCGGCGTGCC CGTGACCGTG
AAGATCAACG TCGACGTCGC GGAGTTCGCG ACGACCAACG GCACGCGCCT GCAGGAAAAC
CTGATCGCGA GCGCCGACAG CCCGTCGGTC TCGAACCTCA GAAAGGCCGG CGCGGTGCTG
CTCGGCCGCA CCAATTCGCC GACGTTCGCA CTGCGCTGGT TCACGTCGAA TCTCGTGCAC
GGCCATACGT ACAATCCGCG CAATCGGTCG CTGACGCCGG GCGGATCGAG CGGCGGCGCG
GCGGCTGCCG TGGCCGCCGG GATCGGCCCG CTCGCGGTCG GCACCGACAT CGGCGGCTCG
GTGCGTTACC CGGCCTATGC GTGCGGCGTG CACGGGATCC GGCCGTCGCT CGGACGCGTG
CCGGCGTTCA ATGCGTCGTC GCCTGAGCGT GCGATCGGCG CGCAGTTGAT GTCGACGACG
GGGCCGATCG CGCGCACGAT CGACGATCTC GCGCTGGCGC TGCAAGCGTT TGCCGCGCCG
GACTCGCGCG ACCCGTGGTA TGTGCCGGTG CCGTTCGAAG GCCGTGCGGT ACCGAAGCGT
GCGGCGTTGT GCGTGCGGCC GGGCGGCCTG CAGGTCGTGC CCGAAGTCGA GGCCGCGTTG
CGCGATGCCG CGCGCCGGCT CGTCGATGCA GGGTGGACAG TCGATGAAAT CGACGATACG
CCACCGATGC GCGAGGCCGC GTTGTTGCAG GAGCAGCTCT GGCTTGGCGA CGGATTCGAC
GCGTTGACGA ATGCGGTCGA AAGCGACGGC GATCCGGGCG CGGCCGCGGT GATCGCGGCC
GTGCGCGGCA AGGTGCGCGA TCTGCCGGCC GACGTGATCA GCCGCGCGCT CGTGCGGCGT
ACGACGCTCA CGCGGCAATG GCGACTGTTT CTCGATGAGT ACGCGGTGCT GCTGCTGCCG
GTGTCGTCGG AGCTGCCGTT CCCTGACGAT CTCGACAGGC AAGGACGCGA AGGGTTCGAG
CGCGTATGGG AAGCGCAGCT CACGCTGCGT GCGCTGCCGG CGATGGGGCT GCCGGGGCTG
GCGGTGACGA CGGGAATCGT CAATGACGTG CCGGTCGGTG TGCAGGTGGT CGCCGCGCAT
CATCGCGAGG ATTTGTGCTT GCTCGCCGGG CGCGACATCG AGGCGCGCGG CGCGCCGGTG
ACGGTGGTCG ATCCGATCGT TTGA
|
|---|
| Protein sequence | MTQQLWQLSA TEIAKRVRQR EVSAREVADA TLARLDAVNP AINAVVEHRP DDVRRQADEV
DRAIARGDDP GPLAGVPVTV KINVDVAEFA TTNGTRLQEN LIASADSPSV SNLRKAGAVL
LGRTNSPTFA LRWFTSNLVH GHTYNPRNRS LTPGGSSGGA AAAVAAGIGP LAVGTDIGGS
VRYPAYACGV HGIRPSLGRV PAFNASSPER AIGAQLMSTT GPIARTIDDL ALALQAFAAP
DSRDPWYVPV PFEGRAVPKR AALCVRPGGL QVVPEVEAAL RDAARRLVDA GWTVDEIDDT
PPMREAALLQ EQLWLGDGFD ALTNAVESDG DPGAAAVIAA VRGKVRDLPA DVISRALVRR
TTLTRQWRLF LDEYAVLLLP VSSELPFPDD LDRQGREGFE RVWEAQLTLR ALPAMGLPGL
AVTTGIVNDV PVGVQVVAAH HREDLCLLAG RDIEARGAPV TVVDPIV
|
|---|
| |