| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3440 |
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| Symbol | |
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| ID | 6181305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 360605 |
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| End bp | 361804 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641683209 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001810123 |
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| Protein GI | 172062472 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACGCGT TTACGCCCTC ATTCCAGAAT CCCGCCGGTT CGCCGATCCG CGAGCTGTTC
AAGTACCTCT CCGAGCCGGG GATGATTTCG TTCGCGGGCG GCTATCCGGC CAGCGACCTG
TTCGACGTCG ACGGCCTGAA CACGGCCGCC GAACGCGCGT ACGCCCAGCC GGTGCGCTGC
CTGCAATACG GCCCGACCGA CGGCCTTGCC GAACTGAAGC AGCAACTGAT TGCGTTGATG
GCGCGCCGCA ACGTCGCGTG CACGCCGGCC GAACTGCTCG TCACGACCGG CTCGCAGCAG
GGCCTCGACC TGCTGCTGCG CGTGATGGTC GCGCCGGGCG ACGTCGTGCT GACCGAACAG
CCGGCTTATC CGGCGACGCT GTCGGCGATG CGCCTGCAGC AGGCGCGCAT CGTCACGATC
CCGGTCGACG CTGAAGGCGT CGACGTCGAC CGCCTCGCGT CGCAACTCGC GTCCGGCGCG
ATCGCGCAGC CGAAACTGCT CTACACCGTC CCGACCTTCG CGAACCCGAC CGGCGCGACG
CTCACGCGCG AACGCCGGCT GAAGCTGCTG CGTCTCGCGG TGCAGTACCG TTTCCTGATC
GTCGAGGACG ATCCGTACGG CGACCTGCGT TTCGCGGGCG AACCGGTGCC GTCGATGCTC
GCGCTCGCGA ACGAAGTGGA AGGCGCGCGC AACTGGATCG TGCATTTCGC GAGCCTGTCG
AAAATCGTCG CGCCGGGGCT GCGCGTGGGC TGGACGATCG CACCGGCCGA GATCGCGCGA
CGCTGCGTGA TCGCGAAGCA GACGGTCGAC CTGTGCAGCA CGCCATGGAC GCAAGCCACC
GCTGCCGAGT ATCTCGCCGA CGGCGCGCTC GAACGCCATC TGCCGCGCAT CACGGCGGCC
TACCGGCGCA AATGCGACGC GATGTGCGAT GCGCTGCGCG ACGGTTTCGG CGATGCGATC
ACGTTCCATC GTCCCGAAGG CGGGATGTTC GTGTGGGCGC GGATCGGTGC GGTGTCGTCG
GACGTGCTGC TGCAACAGGC GATCGCGAAC AAGGTCGTCT TCGTGCCGGG CAAGGCATTC
TTCGCGGACA ACGTCGACGC CGCATCGCTG CGGCTGTCGT TCGCCGCGCC CGACGTCGAT
GCGATCCGGG AAGGCGTGGC GCGCCTGGTG CGCGCATATG GTGCGGCGCT GGCCGCGTGA
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| Protein sequence | MYAFTPSFQN PAGSPIRELF KYLSEPGMIS FAGGYPASDL FDVDGLNTAA ERAYAQPVRC
LQYGPTDGLA ELKQQLIALM ARRNVACTPA ELLVTTGSQQ GLDLLLRVMV APGDVVLTEQ
PAYPATLSAM RLQQARIVTI PVDAEGVDVD RLASQLASGA IAQPKLLYTV PTFANPTGAT
LTRERRLKLL RLAVQYRFLI VEDDPYGDLR FAGEPVPSML ALANEVEGAR NWIVHFASLS
KIVAPGLRVG WTIAPAEIAR RCVIAKQTVD LCSTPWTQAT AAEYLADGAL ERHLPRITAA
YRRKCDAMCD ALRDGFGDAI TFHRPEGGMF VWARIGAVSS DVLLQQAIAN KVVFVPGKAF
FADNVDAASL RLSFAAPDVD AIREGVARLV RAYGAALAA
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