| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3436 |
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| Symbol | |
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| ID | 6180588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 356014 |
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| End bp | 356586 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641683205 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001810119 |
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| Protein GI | 172062468 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4566] Response regulator |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAACA TGACCGACAC GACGCCCCGT CTCGATTACG AAGATCTCTT CCGACATCTG
CCCGTCGCGG CGATCGTGGC CAGGGAGCGG ATCATGGTCG AGTGCAACGA GAAGGCGCTG
CAGTTGTTCC GGGCGACCCG TGACGACATC ATCGACCAGT CGTTCGCGAA GCTGTATCCG
CAGCAGAAGG ACTTCGCGAC GACCGGCCGG CGCCTCGCAC CGCTGCTCGC GAAACATGCC
GGGTTCAGCG ACGATCGCAT CATGCGCCGT GTCGACGGCA GCCATTTCTG GGTCACCGTG
TGCGGCTTCG GATACAACTC GAAGCGGCCC TTCGAGCTGG CCGTCTGGAC CTTCACTGAC
CTGTCGGAGA GCGCGAAGCA TCCCGACGTC ACGAGCACGC TCACCGATCG CGAGCGCGAC
GTCGCGGCAT TCCTGGTTCA CGGCCTGACG AGCAAGGAAA TCGGCAAGGA GCTGAACATC
AGCCCGCGCA CGGTCGACAT CCATCGTGCG AGCTTGCTGC GGAAGTACGA GGTGCGCACG
ACGCATGACC TGATCGCGTG CTTGCTGGCG TGA
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| Protein sequence | MPNMTDTTPR LDYEDLFRHL PVAAIVARER IMVECNEKAL QLFRATRDDI IDQSFAKLYP
QQKDFATTGR RLAPLLAKHA GFSDDRIMRR VDGSHFWVTV CGFGYNSKRP FELAVWTFTD
LSESAKHPDV TSTLTDRERD VAAFLVHGLT SKEIGKELNI SPRTVDIHRA SLLRKYEVRT
THDLIACLLA
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