| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3423 |
|---|
| Symbol | |
|---|
| ID | 6180543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 345818 |
|---|
| End bp | 346159 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641683192 |
|---|
| Product | alkylhydroperoxidase |
|---|
| Protein accession | YP_001810106 |
|---|
| Protein GI | 172062455 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACT GGACTGAAAC TATCGGCGCC GTCACCCGCC GCGTGCATGA ACTTGCACGG
TACACCCCGG ACACCATCAA AGGCGTCGGT TTGCTTGGTG CCGCCGGCGC CAAGACAAAT
CATCTCGACG CAAAGACGCG GGAGCTGATT GCGCTGGCAG TCGCTGTCAC CACACGCTGC
GACGGCTGTA TCGCTTTTCA CGCCGCAGAA GCCAACAAGC TCGGCGTGAC GAAGGAAGAA
GTCGCGGAAG CACTCGGTGT CGCCATCAAT CTCAATGCCG GTGCCGCTGT GGTCTATAGC
ACGCATGTGC TCGACGCGCT GGACCAGCTC GGCCGCGAGT AA
|
|---|
| Protein sequence | MENWTETIGA VTRRVHELAR YTPDTIKGVG LLGAAGAKTN HLDAKTRELI ALAVAVTTRC
DGCIAFHAAE ANKLGVTKEE VAEALGVAIN LNAGAAVVYS THVLDALDQL GRE
|
|---|
| |