Gene BamMC406_3417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3417 
Symbol 
ID6179281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp339648 
End bp340820 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content65% 
IMG OID641683186 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001810100 
Protein GI172062449 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTCTC AAGTCGTCAT CGTCGGCGGT GGTGTGATCG GCAGCTCGAT CGCCTATTTC 
CTGCGCGCTA CCGATCCGAC GGTGTCCGTG ACCGTCATCG AACGCGATCC CACCTATGCG
AAGTCGTCGT CGGCGCTGTC GGCCGCATCG ATTCGCCAGC AGTTCTCGAC GCCGCTGTCG
ATCGAGATGT CGCTGTTCGG GATCGACTTC CTGCGCACGA TCGGCGAGCG GCTCGAGGTC
GATGGCACGC GGCCGTCGAT CGATCTGCAC GAAGGCGGCT ACCTGTTTCT CGCGACACCG
GCAGGCGATG CGACGCTGCG CGAAAACCAT GCGCTGCAGA CGAAGCTCGG CGCCGATATC
CGCTTGATGG ATCGCGATGC GCTGCGCGCG AAGTTTCCGT GGCTGAACGT CGACGATCTC
GTGTCGGGCG CTTATGGCGC AAGCGGCGAA GGGTGGTTCG ACGGCTACGG GCTCGTGCAG
GCGCTGCGCA AGAAGGCGCA GGCACTGGGC GCGCGCTACG TGCCGGCCGA CGTGACCGGC
GTCGTTCGCG ACGGTCGCAA GGTCACGCAT GTGATGACGA GCGACGGCGA GCGCTACGCG
TGCGACACGC TCGTCAACGC GGCGGGGGCG TGGACGCGCA CGCTGTCGTC GATGATGGGC
ATCGACATTC CCGTGTATGC GCGGCGTCGC AGCATCTTCA ACGTGTCGTC GCCGGCGCAG
CTCACCGGTT GTCCGCTGCT GATCGATCCG ACCGGCGTGT ATTTCCGGCC GGAGGGGCGC
ACGTATATCT GCGGGACGTC CCCGAGCCCG GATCGCGATC CCGACGATCT GCCGCTCGAC
GAAGTCGATC ACGACCTGTT CGACGAGGTG ATCTGGCCGA CGCTCGCGAA TCGCGTGCCG
GCGTTCGAAG CGCTGCGCGT GGAGAACTGC TGGTCCGGGT ACTACGAGTA CAACGTGTTC
GATCACAACG CGATCATCGG GTATCACCCC GAGCTGGATA ACGTCGTGTT CGCGAACGGC
TATAGCGGGC ACGGGCTGCA GCAGGGGCCC GCGACCGGGC GTGGGGTGAG TGAACTGATT
CTGGGCGGGC GGTATGAATC GCTCGACCTG TCGTCGCTCG GCTGGGAGCG CGTGCTCGAA
AACCGGCCGA TCGTCGAGAA GAACGTCGTG TAG
 
Protein sequence
MSSQVVIVGG GVIGSSIAYF LRATDPTVSV TVIERDPTYA KSSSALSAAS IRQQFSTPLS 
IEMSLFGIDF LRTIGERLEV DGTRPSIDLH EGGYLFLATP AGDATLRENH ALQTKLGADI
RLMDRDALRA KFPWLNVDDL VSGAYGASGE GWFDGYGLVQ ALRKKAQALG ARYVPADVTG
VVRDGRKVTH VMTSDGERYA CDTLVNAAGA WTRTLSSMMG IDIPVYARRR SIFNVSSPAQ
LTGCPLLIDP TGVYFRPEGR TYICGTSPSP DRDPDDLPLD EVDHDLFDEV IWPTLANRVP
AFEALRVENC WSGYYEYNVF DHNAIIGYHP ELDNVVFANG YSGHGLQQGP ATGRGVSELI
LGGRYESLDL SSLGWERVLE NRPIVEKNVV