Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3417 |
Symbol | |
ID | 6179281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 339648 |
End bp | 340820 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641683186 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001810100 |
Protein GI | 172062449 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTTCTC AAGTCGTCAT CGTCGGCGGT GGTGTGATCG GCAGCTCGAT CGCCTATTTC CTGCGCGCTA CCGATCCGAC GGTGTCCGTG ACCGTCATCG AACGCGATCC CACCTATGCG AAGTCGTCGT CGGCGCTGTC GGCCGCATCG ATTCGCCAGC AGTTCTCGAC GCCGCTGTCG ATCGAGATGT CGCTGTTCGG GATCGACTTC CTGCGCACGA TCGGCGAGCG GCTCGAGGTC GATGGCACGC GGCCGTCGAT CGATCTGCAC GAAGGCGGCT ACCTGTTTCT CGCGACACCG GCAGGCGATG CGACGCTGCG CGAAAACCAT GCGCTGCAGA CGAAGCTCGG CGCCGATATC CGCTTGATGG ATCGCGATGC GCTGCGCGCG AAGTTTCCGT GGCTGAACGT CGACGATCTC GTGTCGGGCG CTTATGGCGC AAGCGGCGAA GGGTGGTTCG ACGGCTACGG GCTCGTGCAG GCGCTGCGCA AGAAGGCGCA GGCACTGGGC GCGCGCTACG TGCCGGCCGA CGTGACCGGC GTCGTTCGCG ACGGTCGCAA GGTCACGCAT GTGATGACGA GCGACGGCGA GCGCTACGCG TGCGACACGC TCGTCAACGC GGCGGGGGCG TGGACGCGCA CGCTGTCGTC GATGATGGGC ATCGACATTC CCGTGTATGC GCGGCGTCGC AGCATCTTCA ACGTGTCGTC GCCGGCGCAG CTCACCGGTT GTCCGCTGCT GATCGATCCG ACCGGCGTGT ATTTCCGGCC GGAGGGGCGC ACGTATATCT GCGGGACGTC CCCGAGCCCG GATCGCGATC CCGACGATCT GCCGCTCGAC GAAGTCGATC ACGACCTGTT CGACGAGGTG ATCTGGCCGA CGCTCGCGAA TCGCGTGCCG GCGTTCGAAG CGCTGCGCGT GGAGAACTGC TGGTCCGGGT ACTACGAGTA CAACGTGTTC GATCACAACG CGATCATCGG GTATCACCCC GAGCTGGATA ACGTCGTGTT CGCGAACGGC TATAGCGGGC ACGGGCTGCA GCAGGGGCCC GCGACCGGGC GTGGGGTGAG TGAACTGATT CTGGGCGGGC GGTATGAATC GCTCGACCTG TCGTCGCTCG GCTGGGAGCG CGTGCTCGAA AACCGGCCGA TCGTCGAGAA GAACGTCGTG TAG
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Protein sequence | MSSQVVIVGG GVIGSSIAYF LRATDPTVSV TVIERDPTYA KSSSALSAAS IRQQFSTPLS IEMSLFGIDF LRTIGERLEV DGTRPSIDLH EGGYLFLATP AGDATLRENH ALQTKLGADI RLMDRDALRA KFPWLNVDDL VSGAYGASGE GWFDGYGLVQ ALRKKAQALG ARYVPADVTG VVRDGRKVTH VMTSDGERYA CDTLVNAAGA WTRTLSSMMG IDIPVYARRR SIFNVSSPAQ LTGCPLLIDP TGVYFRPEGR TYICGTSPSP DRDPDDLPLD EVDHDLFDEV IWPTLANRVP AFEALRVENC WSGYYEYNVF DHNAIIGYHP ELDNVVFANG YSGHGLQQGP ATGRGVSELI LGGRYESLDL SSLGWERVLE NRPIVEKNVV
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