| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3414 |
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| Symbol | |
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| ID | 6179959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 335989 |
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| End bp | 337533 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641683183 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001810097 |
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| Protein GI | 172062446 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATC GAGTAAACGA ACAGACGCTC AAGTCGCATA CCGACCGGCG TCAGCTGTAC
CAGATCATCG CGGGGCTCAC CGAAGGCGTG ATCCTCATCG AACCCGACCA GCGCATCGTG
TGGGCGAACG AGGCCGCGCT CGCGATGCAC GGCGTCACCG AGCTCGATGC ACTCGGCGCG
GACGTGACCG AGTATCGCGA GCGCTTCCGG CTGCGCTACC GGAACAACAA TCCGGTGGGC
GACGGCCACT ATCCGATGGA TCGCGTGATC GCGGGCGAGG AGTTCAGCGA CGTGACGGTC
GAAGTCGAAT CGGCCGCCGA CGAGAACGTG AGCTGGGTCC ACCGGATCCG CAGCCTCGTG
CTGACGAACG CCGCGGGAGA GCCCGACTGT CTCGCGCTCG TGCTGCACGA CGCGACCGAA
TGGGCGAGCG CCGAGGAGCG CTTCGAGCTC ACGTTCAACG CGAACCCCGC GCCGGCCGTG
ATCTGCCGGC TCGACGACCT GCGCTACGTG AAAGTCAATC AAGGCTTCCT CGACATGACG
GGCCACGCAC GCGACGACGT GCTCGGCCGT TCCGTCTACG AAGTCGATGT GCTCGATCAG
GCCGAGCATC GCGAACTCGC GATCGAGCGG CTCGGCGAGG GCGCGACCAT CCCGCAGATG
GAGGCCGTGC TCAAGCGCGC GGACGGCGGC ACGAAGGCGG TCGTCGTCGC CGGGCAGCCG
ATCGACATGA ACGGCGAGGC ATGCATGCTG TTCACGTTCA TGGATCTCGA GCCGCGCAAG
CAGGCCGAAC TCGCGCTGCG GCAGAGCGAG GAGTGCTTCG CGAAGGCGTT CCGGATGGCG
CCGGTCGCGA CCGCGATCGT CACGGCCGAC CGCTTCGAAC TGCTCGACGT GAACGATGCA
TTCGTCGCGA TGGCCGGCCA TGCGCGCGAC GATCTCCTCG GCAAGTCCGC GGACGAGATC
GGGCTGTGGG CCGAGCGCGG TGCGCGCCAG CAGATCGACA GCGCGCTTGC ACGCGACGGC
AACGTGCGCA ACGCGGACGT GCAGATCCGC ACGGGCGATG GCGACGTGCG CGATTGCGTG
GTGTCGGCCG AACCGGTTGC GATTCACGGG CAGGATTGCC TGCTGATCGC GTTGCTCGAC
ATCAGCGATC GCAAGCGTAC CGAGATGGAG CTCGTCTACG CGATCGAGAC CGCGATGCAG
GATGCGTCGT GGTTCAGCCG CACGCTGATC GAGAAACTGG CGAACGTGCG GCGCGAGAAT
GCGCCGGACG CGGGCGCGCA GCTGTCGGAT CTCACCGCGC GCGAGCGCGA CGTGTTCGAT
CTGCTGTGTC ACGGCCTCGC CGACAAGGAG ATCGCCGGCC GCCTCGGGCT CGCGCCGAAC
ACGGTCCGCA ATCATGTCGC GACGATCTAC GCGAAGCTCG ACGTGCATAG CCGCGGCGAG
GCGATCGTGT GGGCGCGCGA GCGCGGGATC GTCGGCGCGG CAGACGCGAA CGGTGCCCGC
GGCGACAAGG GCGCCGACAA GGGCGGTGCG AACGTCAAGG GCTGA
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| Protein sequence | MDDRVNEQTL KSHTDRRQLY QIIAGLTEGV ILIEPDQRIV WANEAALAMH GVTELDALGA
DVTEYRERFR LRYRNNNPVG DGHYPMDRVI AGEEFSDVTV EVESAADENV SWVHRIRSLV
LTNAAGEPDC LALVLHDATE WASAEERFEL TFNANPAPAV ICRLDDLRYV KVNQGFLDMT
GHARDDVLGR SVYEVDVLDQ AEHRELAIER LGEGATIPQM EAVLKRADGG TKAVVVAGQP
IDMNGEACML FTFMDLEPRK QAELALRQSE ECFAKAFRMA PVATAIVTAD RFELLDVNDA
FVAMAGHARD DLLGKSADEI GLWAERGARQ QIDSALARDG NVRNADVQIR TGDGDVRDCV
VSAEPVAIHG QDCLLIALLD ISDRKRTEME LVYAIETAMQ DASWFSRTLI EKLANVRREN
APDAGAQLSD LTARERDVFD LLCHGLADKE IAGRLGLAPN TVRNHVATIY AKLDVHSRGE
AIVWARERGI VGAADANGAR GDKGADKGGA NVKG
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