Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3400 |
Symbol | |
ID | 6180431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 322767 |
End bp | 324059 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641683169 |
Product | major facilitator transporter |
Protein accession | YP_001810083 |
Protein GI | 172062432 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATCTG CCGTCGTCGG TGCGGTGCGC GCCGCCGCCA GCCGCTACCG CTGGACCGTC TGTGCGCTGC TGTTCTTCGC GACCGTCATC AACTACATGG ATCGCCAGAT CCTCGGCCTG CTCGCGCCGA TGCTCCAGCA CGACATCGGC TGGAGCCAGG TGCAGTACGG TCGCATCGTG ATGGCGTTTT CCGCGTTCTA CGCGATCGGC CTGCTTTGCT TCGGTCGCAT CGTCGACTGG CTCGGCACGC GCATCTCGTA TGCGGTCGCG ATGCTGGTGT GGAGCATCGC GGCGATGATG CACGCGATGG TCGGCTCGGT GATGGGCTTC GCGGCGGTGC GCGCGTTGCT CGGGATCGGC GAGGGCGGCA ACTTCCCGGC CGCGATCAAG ACCACGGCCG AATGGTTTCC GCGCCGCGAA CGCGCGCTCG CAACCGGGAT CTTCAACTCG GGCGCGAACA TCGGCGCGGT GTTCGCGCCT GCGATCATCC CGGCGATCGC GGTGGCCTAC GGGTGGCGGG CGGCGTTCGT GATCGTCGGC GCAATCGGCA TCGTGTGGCT CGCGGTGTGG CTGGTGCTCT ATCGCACGGC CGACACGCGC GCGCTCGCCG ACGCCTACGA CGAGCCGCGC GACGAAGCCG AAGCGCTCGA CGCGGCGAAC GTGAACGCCG GCGCGCCGCG CTGGGGCGAA CTGATCCGCA AGCGCGAGAC GTGGGCGTTC CTGATCGGCA AGTTCCTGAC CGACCCGGTG TGGTGGTTCT ATCTGTTCTG GCTGCCGAAG TGGCTCAACG AGTCGCGCGG GATGGACATG CAGCATATCG GCCTGCCGCT CGTGTGCATC TATGCGCTGA CGACGGTCGG CAGCATCGGC GGCGGCTGGC TGTCGTCGGC GTTGCTGCGC GCGGGCTGGA GCGTCAACGG CGCGCGCAAG ACGGCGATGC TGATCTGCGC ATGCTGCGTG CTGCCGATCG CGTTCGTGTC GCAGGTGCAG AACCTGTGGA TCGCGGTGCT GATCGTCGGC CTCGCCGCGG CCGCGCACCA GGGCTGGTCG GCGAACCTGT TCACGACGGC GTCCGACCTG TTCCCGCGAC GTGCGGTCGC GTCGGTGGTC GGCATCGGCG GGATGGCCGG CTCGATCGGC GGCGTGCTGT TCTCGGAAGT GATCGGCCAG GTGCTGCAAC GCACGGGCCA CTACTGGGTG CTGTTCGCGA TCGGCGCGCT CGCCTACCTG CTCGCGCTGG CGGTCATGCA CGTGCTCACG CCGAAGATGA AGCCCGCGAA GCTCGACGCG TGA
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Protein sequence | MQSAVVGAVR AAASRYRWTV CALLFFATVI NYMDRQILGL LAPMLQHDIG WSQVQYGRIV MAFSAFYAIG LLCFGRIVDW LGTRISYAVA MLVWSIAAMM HAMVGSVMGF AAVRALLGIG EGGNFPAAIK TTAEWFPRRE RALATGIFNS GANIGAVFAP AIIPAIAVAY GWRAAFVIVG AIGIVWLAVW LVLYRTADTR ALADAYDEPR DEAEALDAAN VNAGAPRWGE LIRKRETWAF LIGKFLTDPV WWFYLFWLPK WLNESRGMDM QHIGLPLVCI YALTTVGSIG GGWLSSALLR AGWSVNGARK TAMLICACCV LPIAFVSQVQ NLWIAVLIVG LAAAAHQGWS ANLFTTASDL FPRRAVASVV GIGGMAGSIG GVLFSEVIGQ VLQRTGHYWV LFAIGALAYL LALAVMHVLT PKMKPAKLDA
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