| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3399 |
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| Symbol | |
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| ID | 6180430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 320950 |
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| End bp | 322425 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641683168 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001810082 |
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| Protein GI | 172062431 |
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| COG category | [F] Nucleotide transport and metabolism
[L] Replication, recombination and repair |
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| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[COG2169] Adenosine deaminase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTACA GTCGTCGCAT GCGCCTCGAT CCCGACACCT GCTACGCAGC CCTGCTTTCG
CGGAACCGCC GCTTCGACGG CTGGTTCTTC GTCGGCGTGG CGACGACCGG TGTGTATTGC
CGCCCCCTTT GTCCGGTGAA ACCGCCGAAG GCGCGCAACT GCAGCTATTA CGCGAGCGCC
GCCGCCGCGG AGAAAGCCGG CTTTCGGCCG TGCATGCGCT GCCGGCCCGA GCTCGCGCCC
GGCCACGGGC TGCTCGACCT GTCCGGCAAT CTCGCCGACG CGGCCGCCAC GCTGATCGAG
GACGGTTTCC TGGACGAGCG CTCGGTCAAC GCGCTCGCGC AGCGCGTCGG CGTGACCGAG
CGCCACCTGC GCCGGATCTT CGCCGCGCAG TTCGGTGTCT CGCCGGTCGA GTTCGCGCAG
ACGCACCGGC TGCTGATGGC CAAGCGCCTC CTGACCGATA CCGCGCTGCC GGTGGCCGTC
GTCGCGTCGA CCGCCGGGTT TGGCAGCGTG CGGCGCTTGA ACGACTTGTT CCGGCAACGC
TACGGCCTCA ATCCGCTGCG CCTGCGCAAG GGCGCCGGCG CAGCGGGCGG CGGCGACATG
ACGTTCCCGC TGCCGTACCG GCCGCCGTTC GCGTGGCCCG AGTTGATGCG CTTTCTCGCG
CAGCGGCAGA TCGACGGCGT CGAGCGGATC GACGCACAGG GCTATGCGCG CGTCGTCGCA
CTGCCGAACG GCAGCGGTCA TGTGACGGGC TGGCTGTCCG TCACGCACGT GCCGCAGCGG
TTCGCGCTCG CAGTCACCGT GTCGCCCGCG CTGACGCCCG TCGTGCCGGC CGTGCTCGCG
CGCGTGCGGC GGCTGTTCGA TCTCGACAGC CGCCCCGACG TGATCGACGC GCATCTCGGC
GCACTCGCGC ACGGCTCGCC CGGTCTGCGT GTACCCGGCG CGTTCGACGG GCTCGAGATC
GCGATCCGTG CGCTCGCGGG CGAGCATCTG GCCGCGACGC ACGCAGGCCC GGTGCTGACG
CGGGTTGCCG AACGCTTCGG TACGTCGGTC GCCGACGCCG CGCCCAGCCT CACGCATGCG
TTGCCTTCAG CTGCGATACT GGCGGTCGCG CCGCCGGCGG CGCTCGAAGC AATCGGCGTG
ACGCGCGAGG CCGCGCGGGC GATCGTGTCA CTGGCCCGCG TCGTTGCAGA CGGCACGCTC
GCGCTCGAAC CGATGGCGCC GCTCGATGCG ACGCTCGCCG CGTTGCGCGC GCTGTCCGGC
TTCGACGAAC GCGCGGTGCA GTACGTCGCG ATGCGTGCGA TGGCCTGGCC GAACGCGTTC
CCCGCCGACG ACGCGTGGCT CGCGCCGCGC GTCGCCGCCG AACGCCCGCG CATCGCGTCA
TCCGCGTCAT CCGCGCCCGA TGCGGCGCGT TGGGCGCCGT GGCGCGCGTA TGCCGCACTG
CATGTGTGGC GCCTTCATGG AGAAGCTTCG CGATGA
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| Protein sequence | MVYSRRMRLD PDTCYAALLS RNRRFDGWFF VGVATTGVYC RPLCPVKPPK ARNCSYYASA
AAAEKAGFRP CMRCRPELAP GHGLLDLSGN LADAAATLIE DGFLDERSVN ALAQRVGVTE
RHLRRIFAAQ FGVSPVEFAQ THRLLMAKRL LTDTALPVAV VASTAGFGSV RRLNDLFRQR
YGLNPLRLRK GAGAAGGGDM TFPLPYRPPF AWPELMRFLA QRQIDGVERI DAQGYARVVA
LPNGSGHVTG WLSVTHVPQR FALAVTVSPA LTPVVPAVLA RVRRLFDLDS RPDVIDAHLG
ALAHGSPGLR VPGAFDGLEI AIRALAGEHL AATHAGPVLT RVAERFGTSV ADAAPSLTHA
LPSAAILAVA PPAALEAIGV TREAARAIVS LARVVADGTL ALEPMAPLDA TLAALRALSG
FDERAVQYVA MRAMAWPNAF PADDAWLAPR VAAERPRIAS SASSAPDAAR WAPWRAYAAL
HVWRLHGEAS R
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