Gene BamMC406_3395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3395 
Symbol 
ID6181299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp318135 
End bp318626 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content68% 
IMG OID641683164 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001810078 
Protein GI172062427 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.408663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCA TCACGCTCGA CGATCTCGAC CTGCGCATTC TCGCGATCCT GCAGGACGAC 
GCATCGGTGT CGAACCTGCA ACTGGCCGAG CGTGCGCTGT CGTCGCCGCC GACCTGCATG
CGCCGCGTGC GGCGGCTGAC GGAGGCGGGC GTGATCCGCC GCCAGGTCGC GGTGCTCGAT
CCGGTCGCGA TCGGCACGGC GGTCACGGCG TTGATCGAGA TCAGCCTCGA CCGGCAGACG
GCCGAAGACT ACGACGCGTT CGAAGCCTAC GTGTGTGCGG AGCCGGCGGT CACGCAGTGC
TACCGCGTGT CGCCGGGGCC CGATTTCGTG GTGATTGCCG ATCTTACCGA CGTCGCCGAA
TACGACGCGT TCGCGCGGCG GCTGTTCACC GGCGCATCGA ACGTGCGCAA CGTGCGGACG
TTCTTCTCGA CGCATCGCGC GAAGTTCGAG GCGAACGCGC GGGTCGCGCA TGCGATGCGC
AAGCGCGCAT AG
 
Protein sequence
MAGITLDDLD LRILAILQDD ASVSNLQLAE RALSSPPTCM RRVRRLTEAG VIRRQVAVLD 
PVAIGTAVTA LIEISLDRQT AEDYDAFEAY VCAEPAVTQC YRVSPGPDFV VIADLTDVAE
YDAFARRLFT GASNVRNVRT FFSTHRAKFE ANARVAHAMR KRA