| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3392 |
|---|
| Symbol | |
|---|
| ID | 6180087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 314715 |
|---|
| End bp | 315548 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641683161 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001810075 |
|---|
| Protein GI | 172062424 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1512] Beta-propeller domains of methanol dehydrogenase type |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.261896 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTCG TCTTCGCCTT CTTTGTGTTG GGGGGAGTTC ACGCCCACGC GGACGCCGTT
GTCCCGCCGC TGACATCGAG AGTAACCGAT GAGACTGGAA CCCTGACCAG CGACCAGAAG
GCTGGCCTTG AGCAGACGTT GAAAGAGTTC GAAGCGAAAA AGGGAACGCA GATTTCGGTT
CTTGTTGTTC CAACCACGGG GCCGGAAACC ATCGAACAGT ATTCGATGCG AGTCGTCGAG
CAATGGAAGC TTGGGCGCAA GAACGTCGAC GACGGCGCGC TCCTGATTAT CGCCAAGAAC
GACCGAACGC TTCGAATCGA GGTCGGTTAC GGCCTCGAAG GCGTGCTCAC CGACGCGACG
AGCAATCGCA TCATCAACGA GGCAATCGTT CCCCGGTTCC GAAACGGCGA TTTCTACGGC
GGCATCACGG CGGGCCTCGA CGGCATGATG CGCGTCACCA GCGGCGAGCA GTTGCCCCCG
CCGCGGCGAC GAGATCAGGC AAGCACCGGC GCCGGACGGT TACTTCCGCT TCTCTTCCTC
CTGACGGTCA TGGCCGGCGG CCTCCTGCGC GCCATGCTCG GGAGATTGCC GGGGGCCGCC
GTTACAGGCG GAGTCGTGGG TGTACTCGCG TGGGTTTTAT CGGGGGCGCT ATTTGTCGCT
ATTGCGGCAG GACTGATGGC GCTGCTCTTC ACGTTGCTGG GGGGCGGGAT GGGCGCGGTT
GGCGGGCGCT TCATTGGCGG TAGCGGTGGG CGTTTCGGTA GTGATTCGAA TCGCGACATC
TTTCGCGGAG GCGGTGGAGG CTTTGGCGGC GGTGGCGCAT CGGGACGGTG GTGA
|
|---|
| Protein sequence | MAVVFAFFVL GGVHAHADAV VPPLTSRVTD ETGTLTSDQK AGLEQTLKEF EAKKGTQISV
LVVPTTGPET IEQYSMRVVE QWKLGRKNVD DGALLIIAKN DRTLRIEVGY GLEGVLTDAT
SNRIINEAIV PRFRNGDFYG GITAGLDGMM RVTSGEQLPP PRRRDQASTG AGRLLPLLFL
LTVMAGGLLR AMLGRLPGAA VTGGVVGVLA WVLSGALFVA IAAGLMALLF TLLGGGMGAV
GGRFIGGSGG RFGSDSNRDI FRGGGGGFGG GGASGRW
|
|---|
| |