| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3362 |
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| Symbol | |
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| ID | 6179170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 273734 |
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| End bp | 274513 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641683131 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001810045 |
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| Protein GI | 172062394 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.947162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCCA AGATTGACGG TCGCCTTGCC GGCAAGGTCG CCATCGTGAG CGGCGGCGCG
GGCGGATGCG GCGCCGCCGC GTCCGAGCTG TTCGCCGCGC AGGGCGCGAA GGTGGCGATC
ATCGACCGTG ATGGCGACGC GGCCGACACG CTCGCGTCGC GGTTGCGTGA TGCCGGCTTG
CAGGCGATCG GCCTGCAAGC CGACGTGTCG AAGCAGCCGG ACGTGCAGAC CGCGGTCGAT
GCGGCCCGTG CGCAGTACGG CAACGCGGAC ATCCTGTTCA ATCATGCGGG CACGCTGATC
GTCAAACCGT TCCTCGATAT CGAGGAGTCG GAATGGGACT GGCTGATGGG CGTGAACGTG
AAGAGCATGT TCCTGATGAC GAAGGCGGTG CTGCCGCAGA TGCTGGAAAA AGGACGCGGC
AGCATCGTCT GTACGTCGTC GATCTCGGCC GTCTTCGCGA CGCCCGGCGA GGTGCTGTAT
GACGCGACCA AGGGTGCGTG CCAGATGTTC GCGCGCGCGA TCGCCGTCGA ATACCGCGAT
CGCGGCATCC GCTGCAACGC ATTGGCGCCG GGGTTCATCC GCACGCCGCA CGGCATGCGC
GAGCTGAAGG ATCTGCAGGC GATGGGCGTG GACGCGACCG AGGCGGCCGT CGCGGTGCAG
CAGGGCAGGC TGTGCGAGCC GTCGGAAGTG GCCGCGGCCG CGCTGTTCCT TGCGTCCGAC
GAATCGAGCT TCGTCAACGG CACCCAGCTG TTCGTCGACA ACTGTTTTTC CGCCGTTTAG
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| Protein sequence | MNAKIDGRLA GKVAIVSGGA GGCGAAASEL FAAQGAKVAI IDRDGDAADT LASRLRDAGL
QAIGLQADVS KQPDVQTAVD AARAQYGNAD ILFNHAGTLI VKPFLDIEES EWDWLMGVNV
KSMFLMTKAV LPQMLEKGRG SIVCTSSISA VFATPGEVLY DATKGACQMF ARAIAVEYRD
RGIRCNALAP GFIRTPHGMR ELKDLQAMGV DATEAAVAVQ QGRLCEPSEV AAAALFLASD
ESSFVNGTQL FVDNCFSAV
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