| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3358 |
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| Symbol | |
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| ID | 6179262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 268736 |
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| End bp | 270586 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641683127 |
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| Product | peptidase S10 serine carboxypeptidase |
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| Protein accession | YP_001810041 |
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| Protein GI | 172062390 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCAG ACAGGAGCAG TACCGGCAGC CGCCGCGAAC GCCGCGGCCG GCTGGCCGGG
CTAGGCGCAT TGACCGTCTT GACCATGGTG CTCGCGGGCT GCGGCGGCGA CGATTCGTCG
TCGGTCGGCG CGTCGAGCCT CGCGCAGGCC ACCGCCAGCC AGCAGGCCGG CGCGCAACAG
GCGGCCGGCA ATCAAACTTC GGCGGCGAAC CAGCCTTACG TCGACCCCGT TGCCTATTCG
ATGAACGCGA CAGACGGCCT TGCGGCCGCG CAGGTGTCGG AGAAGGCCGC GGTGATGCAT
TACCAGTGGA AATCCGGCGG CACGACGGTC AACTACACGA CGACCACTGG CCACCTGACC
GCGCAGGATG CGAACGGCAA CGCGGAAGCG TCGATGTCGT ATGTCGCGTA CACCGCGCCG
AGCACGAACG GCAAGCCGCG TCCCGTCACG TTCGTCTATA ACGGCGGCCC CGGCTCGTCG
TCGATCTGGC TGCGGCTCGG CTCGTTCGCG CCGACGCGCG TCGCGACGCC CGATCCGCTG
TTCGGCACCA ACTGGCCGAA CTATCCGCTC GTCGACAACG CGGAAAGCCT GATCGACACC
ACCGACCTCG TGTTCATCGA CCCGCCGGGA ACCGGGCTGT CGGAAGCCGT GTTGCCGAAC
ACCAACCAGA AGTACTGGGG CTCCGACGCG GACGTCAACG TCATGCGCGA CTTCATCCAG
CGCTACCTGA ACGTGAACGG CCGCGGCACG TCGCCGATCT ACCTGTACGG CGAATCGTAC
GGCACGCCGC GCACCGACAT GCTCGCGCTG GCGCTCGAAT CGGCCGGCGT GCACCTCACA
GGTATCGTGC TGCAATCGGC GATCCTGAAC TACTTCGCGG ATGCGGTGGA GGCGGTGGCG
ATTACGCAGT CGACCGAAGG GCTGCTGCTC GACACCGATA CCGTGGCCGG CTATCTGCCC
GGCTATGCGG CGGTCGCGGC GTACTTCAAC CAGGTGTCGC CGGCGCCGGT CAATCCGTTT
CTGTATGCAG TGCAGACCGA ACTGTTCACG ACGCTGATCT ACAACCAGCT GCAGAAGTAC
TCGCAGTCGT GGGTGCTGAG CCAGCTCGGC ATTCCGGATG CGCTCGGCAC GCCGGTGTTC
CCGAGCGACG CGACGCTGAA GCTGTGGTCG ATCCCGTCGA GCCTTACGCA ACAGGCGCTG
CGCGACTACT TCAACGCGAA CCCGTTCGGC ACGAACCTGG TGCCCGGCAC GACGATCGGC
CGCTACGACG GACGCGTGTC GTTGCCGAAC AGCGATCCGC GGCTGCAGAC GGACGGCGAC
CCGTCGGACA TCCTGATCTC GCAGCCGTTC ACGAACGCGC TCGCGACGCA GATGCCCGAC
TACCTCGGCT ACACCGCGCC GAACGCGACC TACCTGCCGT TGAACGACAA CATCATCCAG
GTGTGGGACT TCTCGCATGA CGGCCAGCCG ATGCCCGACA CGATCCCCGA TCTGCTCGGC
GCGCTGCAGC TCAATCCGAA GCTCCACGTG CTCGCGGAGA ACGGCCTCCA CGACCTCGCC
ACGCCGTTCT TCAACACGGA GAAGCAGCTT GCCCGTCTGC AGACGGTGAA GGGCCTGAAT
CCGAAGCTGC AGGTGAACTT CTTCCAGGGC GGCCACATGA CGTATCTGGA TGACGTCGCA
CGTCCGCAGA TGAAGCGCGA CCTGGCGACC TTCTACAAGG GCGCGCGGAT TCCGACGGCG
CTGACGCTGA AGACCCTGCC GCCGCCGTGG CCGGACGAGA ATCCGGCCGG CACGCCGACC
GGCAGCGCGC CGGGTGCGAC GGCCTCGACT TCGCTGGCAG CGGCACCGTA A
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| Protein sequence | MQPDRSSTGS RRERRGRLAG LGALTVLTMV LAGCGGDDSS SVGASSLAQA TASQQAGAQQ
AAGNQTSAAN QPYVDPVAYS MNATDGLAAA QVSEKAAVMH YQWKSGGTTV NYTTTTGHLT
AQDANGNAEA SMSYVAYTAP STNGKPRPVT FVYNGGPGSS SIWLRLGSFA PTRVATPDPL
FGTNWPNYPL VDNAESLIDT TDLVFIDPPG TGLSEAVLPN TNQKYWGSDA DVNVMRDFIQ
RYLNVNGRGT SPIYLYGESY GTPRTDMLAL ALESAGVHLT GIVLQSAILN YFADAVEAVA
ITQSTEGLLL DTDTVAGYLP GYAAVAAYFN QVSPAPVNPF LYAVQTELFT TLIYNQLQKY
SQSWVLSQLG IPDALGTPVF PSDATLKLWS IPSSLTQQAL RDYFNANPFG TNLVPGTTIG
RYDGRVSLPN SDPRLQTDGD PSDILISQPF TNALATQMPD YLGYTAPNAT YLPLNDNIIQ
VWDFSHDGQP MPDTIPDLLG ALQLNPKLHV LAENGLHDLA TPFFNTEKQL ARLQTVKGLN
PKLQVNFFQG GHMTYLDDVA RPQMKRDLAT FYKGARIPTA LTLKTLPPPW PDENPAGTPT
GSAPGATAST SLAAAP
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