| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3357 |
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| Symbol | |
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| ID | 6180963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 266102 |
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| End bp | 267916 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641683126 |
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| Product | endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_001810040 |
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| Protein GI | 172062389 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTCGA CAATCCGCCT GTTTGCCCCG CTATTGCTGC TGCCCACGCT TGCCGCGCCG
GTCCTCGCGG CGACCGCCGC CCCCGTCAGC CCGAACTGCG GCGGCAGCAC GACGCCGATC
GCCGATATCC AGGGGCCGGG CGCGCCGTCG CCGCTCGCCG GCCAGAACGC GTCGATCGAG
GCGGTCGTCA CGGCCGATTT CGGCGGCACG GACGGCTTCG GCGGCTTCTT CGTCCAGCAG
GCCGACCCGC AGCGCCGCAA CCAGCCGGGC GTGTCCGAAG GCCTGTTCGT CTATGCGCCG
AAAGTGCGCG CGAAGGCCGG CGATCTCGTG CATGTGACGG GCAAGATCGA GGAGAAATAC
GGGCAGACGC AGCTCACGCT GTCGGGCGCG ATCGCGGTGT GCGCGAACGG CCAGACGGTC
ACGCCGGCGA CGCTCACGCT TCCGGTCGAC AGCCCGAACG CATTCGCCGC GTATGAAGGA
ATGCTGGTAC GCCTGCCGCA GACGCTCACC GTCACCGACA ACTACGAGCT CGGCCGCTAC
GGCAGCACGA TGCTGAGCAA CGGCCGACTG CGCACGCCGA CGAGCGTGGT GCCGCCGTCG
CAGGTGCAAG CGCAGATCGA TGCGAACGCA CGCAACCGGC TGATCCTCGA CGACGGCTCG
AACAAGCAGA ACCCCGCGAA CGTGCCGTAT CCGGCGCCGG AACTGTCGGC CGCGAACACG
CTGCGCTCGG GCTATACCGT GCGCAACGTC GAAGGCGTGC TCGAGGTGCG CTACGGAGCA
TGGCGTGTGC AGCCGCTGCC CGGCGCGGCC GCACCGACGT TCGACACGCG CTCGAACCCG
CGCACCAACG CACCGGCACG CGATCCGAAA TCGAATCTGC GCGTCGCGTC GTTCAACGTC
CTCAACTACT TCAACGGCAA CGGCATGGGC GGCGGCTTCG ACGATCCGAA CAACCGCGGC
GCGAAGAACT ATCAGGAATT CCAGCGTCAG GAAGCGAAGA TCGTCAGCGC GCTGAAGGCG
CTCGACGCCG ACGTGATCGG CCTGATGGAA ATCCAGAACA ACGGCTACGG CGAACTGAGC
GCGGTGCGCC AGCTCGCGGC GAAGCTCGGC AGCAACTGGC GCGTGGTCGA TCCGGGCACG
TCGCGCCTCG GCGGCGACGC GATCACGGTC GCGATGATCT ACGACAGCCG CACGGTCGAA
CCGGTCGGCC GCGCGTCGAC GCTCGCGATC GACGACAAGA ACCGTCAGCC GCTCGCGCAG
TCGTTCCGCC GCGTCGGCGG CAACAAGCAG GCGCTGACGA TCGCGGTCAA CCACCTGAAG
TCGAAGAACT GCCCGGACGC GGCGAACGAC GACCTCGACC AGGGCGACGG CCAGGGCTGC
TGGAACCCGA CGCGCACGCG CGCGGCGGCG AAGCTGGCCG ACTGGCTCGC CGGCACGCCG
ACGGGCGTCG CGGGGCAGGG CACGCTGCTG ATCGGCGACT TCAACAGCTA CACGTATGAA
GACCCGATCC GCCTGCTCGA AGCGCGCGGC TACCGCAACC TCGTGTCGCG CTGGATCGGT
GCGAACGCGT ACAGCTACGT GTACAACGGC GAAGCCGGCT ACCTCGATCA CGCGCTCGCA
TCGCTGCCGC TCGCGTCGCA CGTGAAGGCC GTGCACGAAT GGCACATCAA CGCGGACGAG
CCGCTCGCGC TGCAGTACAC GCTCGCGTAC AAGTCGGCCG AGCAGCAGAA GACGTACTAC
GCGCCGGATG CGTATCGCTC GTCGGATCAC GATCCGGTGC TGATCGATAT CGCGCTGCCG
GGCGGCGGGC GCTGA
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| Protein sequence | MRSTIRLFAP LLLLPTLAAP VLAATAAPVS PNCGGSTTPI ADIQGPGAPS PLAGQNASIE
AVVTADFGGT DGFGGFFVQQ ADPQRRNQPG VSEGLFVYAP KVRAKAGDLV HVTGKIEEKY
GQTQLTLSGA IAVCANGQTV TPATLTLPVD SPNAFAAYEG MLVRLPQTLT VTDNYELGRY
GSTMLSNGRL RTPTSVVPPS QVQAQIDANA RNRLILDDGS NKQNPANVPY PAPELSAANT
LRSGYTVRNV EGVLEVRYGA WRVQPLPGAA APTFDTRSNP RTNAPARDPK SNLRVASFNV
LNYFNGNGMG GGFDDPNNRG AKNYQEFQRQ EAKIVSALKA LDADVIGLME IQNNGYGELS
AVRQLAAKLG SNWRVVDPGT SRLGGDAITV AMIYDSRTVE PVGRASTLAI DDKNRQPLAQ
SFRRVGGNKQ ALTIAVNHLK SKNCPDAAND DLDQGDGQGC WNPTRTRAAA KLADWLAGTP
TGVAGQGTLL IGDFNSYTYE DPIRLLEARG YRNLVSRWIG ANAYSYVYNG EAGYLDHALA
SLPLASHVKA VHEWHINADE PLALQYTLAY KSAEQQKTYY APDAYRSSDH DPVLIDIALP
GGGR
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