| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3335 |
|---|
| Symbol | |
|---|
| ID | 6180417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 243377 |
|---|
| End bp | 244210 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641683105 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001810019 |
|---|
| Protein GI | 172062368 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCCG ACGTGAACTC CTCCCACCGC GACACCGATC GCTTCAACGT GTCGTTCAAG
GCGCTCGGCG AATTGATCGA GACGGTCGGC ACGCCGCACT TCGTGCCGCG TCTCACGCAA
CTGCTGAACG ACGTGGTGCC GCTCGACGTC GCGCACGTCG AACGCTCGCG CGTCGACGGC
GCGATGCCGA CCGGCTATCG CTGCGAATGG ATCGGCAGCA GCGGCATCGG CGCCGGGACT
GATACCGCCG AAATCTCCGA CGTGATGACG CTCTACTACG AGCGCTTTTT CGACAGCGAT
CCGCTGTTCG CGGGGCTGCG CGGCAAGACG GGCACGCTGC TCGTCGTGCG CGACATCGCG
GCGATCCCGC CCGGCGAGTT CCGCCAGCGA CTGTTCGACG ACGTGCGTAT CGGCCACGAA
TGCGTGCTCG CGCGCGGCAC CCGCTATGCG CAGCATTCGA TCGCGCTCGA ACGCGGCCGC
GACCGTCCGC CGTTCACGCT CGCCGAGATG AGCCGCTTTC GCAGCATCAG CGACGTGCTG
TTCCCGCTGC TCGAGCTGCA CGCGTCGACC ACCGCCGCGC GGCGCATCGC GCATCCGACG
CCCGACGTGC ATCCGCTCGC GCGGTTCGAT GCGCGGATCG CGGCCGACGG CGTGAAGCTG
TCGAAGCGCG AATACGAAAC CTGCAAGCAC CTGATCTCCG GCAAGACCGT GCCGGAGACC
GCCGAGATCC TCGGCGTGCG GGTCGCGTCG GCCGAGTCGT ACGTGAAGCG CGCGTTCGCG
AAGCTCGGCG TGCGCACGAA GCGCGAGCTC GCCGCATGGG GCGCGATCGA TTGA
|
|---|
| Protein sequence | MLPDVNSSHR DTDRFNVSFK ALGELIETVG TPHFVPRLTQ LLNDVVPLDV AHVERSRVDG
AMPTGYRCEW IGSSGIGAGT DTAEISDVMT LYYERFFDSD PLFAGLRGKT GTLLVVRDIA
AIPPGEFRQR LFDDVRIGHE CVLARGTRYA QHSIALERGR DRPPFTLAEM SRFRSISDVL
FPLLELHAST TAARRIAHPT PDVHPLARFD ARIAADGVKL SKREYETCKH LISGKTVPET
AEILGVRVAS AESYVKRAFA KLGVRTKREL AAWGAID
|
|---|
| |