Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3331 |
Symbol | |
ID | 6180263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 240948 |
End bp | 241736 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641683101 |
Product | trans-aconitate 2-methyltransferase |
Protein accession | YP_001810015 |
Protein GI | 172062364 |
COG category | [R] General function prediction only |
COG ID | [COG4106] Trans-aconitate methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.911002 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGACCC CACCCGATCA ATACGCGAAA CAGTACGTGC GATTCGAAGA CGAACGCACG CGGCCTGTGC GCGACCTGCT GGCCGCGGTG CCCGATACGC CGATCCGAAC CGCGATCGAC ATCGGCTGCG GGCCGGGAAA TTCGACAGAG GCGCTGATCG CGCGTGCGCG CGACGCGACG GTCCGCGGTA TCGACGCGTC GCCGGACATG ATCGCGGCTG CGCGCAAGCG CCTGCCCGCG CTGCGTTTCG ATCTGGCGGA TGTTTCCACC TGGGACGATC CCGGCGGCTA CGACCTGATC CTGTCGAACG CGGTGCTGCA GTGGGTGCCT GCGCACGACA CGCTGTTTCC GTCTCTTGTC GGCTGGCTCG CGCCGGGCGG CCATCTCGCG GTGCAGATGC CCGACAACCT CGACGAACCC GCGCACCGTC TGATGCGGGA AGTCGCCGCG GCCGGGCCGT GGGTGGACAA GCTGAAAGAC GTCGCGCGCA CCGAGCGGTT CGATGCGCGG TACTACTACA CGTTGCTGTC GCCGATGTGT TCGCGAGTCG ATGTATGGCG CACGACTTAC TACCATCCGC TGAGCGGCGG CGCCGATGCG GTCGTCGAAT GGTTCAAGGG CAGCGCGCTT CGGCCGTTCC TCGCGGCGCT GGACGACGAC AGCGAACGCG ACGCGTTCAT CGCGCGCTAT CGCGATGCAC TCGCGGGACC GGACGGCTAT CCGGTGCTCG ACGACGGCAC CGTGCTGCTG CCGTTCCCGC GACTGTTCAT CGTCGCGACG CGGAAGTAA
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Protein sequence | MTTPPDQYAK QYVRFEDERT RPVRDLLAAV PDTPIRTAID IGCGPGNSTE ALIARARDAT VRGIDASPDM IAAARKRLPA LRFDLADVST WDDPGGYDLI LSNAVLQWVP AHDTLFPSLV GWLAPGGHLA VQMPDNLDEP AHRLMREVAA AGPWVDKLKD VARTERFDAR YYYTLLSPMC SRVDVWRTTY YHPLSGGADA VVEWFKGSAL RPFLAALDDD SERDAFIARY RDALAGPDGY PVLDDGTVLL PFPRLFIVAT RK
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