Gene BamMC406_3331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3331 
Symbol 
ID6180263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp240948 
End bp241736 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content67% 
IMG OID641683101 
Producttrans-aconitate 2-methyltransferase 
Protein accessionYP_001810015 
Protein GI172062364 
COG category[R] General function prediction only 
COG ID[COG4106] Trans-aconitate methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.911002 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACCC CACCCGATCA ATACGCGAAA CAGTACGTGC GATTCGAAGA CGAACGCACG 
CGGCCTGTGC GCGACCTGCT GGCCGCGGTG CCCGATACGC CGATCCGAAC CGCGATCGAC
ATCGGCTGCG GGCCGGGAAA TTCGACAGAG GCGCTGATCG CGCGTGCGCG CGACGCGACG
GTCCGCGGTA TCGACGCGTC GCCGGACATG ATCGCGGCTG CGCGCAAGCG CCTGCCCGCG
CTGCGTTTCG ATCTGGCGGA TGTTTCCACC TGGGACGATC CCGGCGGCTA CGACCTGATC
CTGTCGAACG CGGTGCTGCA GTGGGTGCCT GCGCACGACA CGCTGTTTCC GTCTCTTGTC
GGCTGGCTCG CGCCGGGCGG CCATCTCGCG GTGCAGATGC CCGACAACCT CGACGAACCC
GCGCACCGTC TGATGCGGGA AGTCGCCGCG GCCGGGCCGT GGGTGGACAA GCTGAAAGAC
GTCGCGCGCA CCGAGCGGTT CGATGCGCGG TACTACTACA CGTTGCTGTC GCCGATGTGT
TCGCGAGTCG ATGTATGGCG CACGACTTAC TACCATCCGC TGAGCGGCGG CGCCGATGCG
GTCGTCGAAT GGTTCAAGGG CAGCGCGCTT CGGCCGTTCC TCGCGGCGCT GGACGACGAC
AGCGAACGCG ACGCGTTCAT CGCGCGCTAT CGCGATGCAC TCGCGGGACC GGACGGCTAT
CCGGTGCTCG ACGACGGCAC CGTGCTGCTG CCGTTCCCGC GACTGTTCAT CGTCGCGACG
CGGAAGTAA
 
Protein sequence
MTTPPDQYAK QYVRFEDERT RPVRDLLAAV PDTPIRTAID IGCGPGNSTE ALIARARDAT 
VRGIDASPDM IAAARKRLPA LRFDLADVST WDDPGGYDLI LSNAVLQWVP AHDTLFPSLV
GWLAPGGHLA VQMPDNLDEP AHRLMREVAA AGPWVDKLKD VARTERFDAR YYYTLLSPMC
SRVDVWRTTY YHPLSGGADA VVEWFKGSAL RPFLAALDDD SERDAFIARY RDALAGPDGY
PVLDDGTVLL PFPRLFIVAT RK