Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3308 |
Symbol | |
ID | 6179854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 218995 |
End bp | 220011 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641683080 |
Product | 1-aminocyclopropane-1-carboxylate deaminase |
Protein accession | YP_001809994 |
Protein GI | 172062343 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
TIGRFAM ID | [TIGR01274] 1-aminocyclopropane-1-carboxylate deaminase [TIGR01275] pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.951814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0253505 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGC AACGCTTCCC CCGTTATCCG CTGACGTTCG GCCCCACGCC GATCCAGCCG CTCAAGCGCC TGAGCGCGCA CCTCGGCGGC AAGGTCAAGT TGTATGCGAA ACGCGAGGAC TGCAACAGCG GTCTCGCGTT CGGTGGCAAC AAGACGCGCA AGCTCGAATA CCTGATCCCC GACGCGCTCG CGCAGGGTGC GGACACGCTC GTGTCGATCG GCGGCGTCCA GTCGAACCAG ACGCGCCAGG TCGCGGCCGT CGCCGCGCAT CTCGGGATGA AATGCGTGCT CGTGCAGGAG CACTGGGTCA ACTACGACGA TCCCGTCTAC GACCGCGTCG GCAATATCCA GCTATCGCGG ATGATGGGCG CCGACGTGCG GCTCGTTGCC GACGGCTTCG ACATCGGCAT CCGCCGTAGT TGGGAAGAAG CGATGGAGAG CGTGCGGCAG GCGGGCGGCA AGCCGTATCC GATCCCAGCC GGATGCTCCG AGCATCCGCT CGGCGGGCTC GGGTTCGTCG GCTTCGCGGA AGAAGTGCGC GCGCAGGAAG CAGAACTCGG ATTCAAGTTC GACTACATCG TCGTGTGCTC GGTGACGGGC AGCACGCAGG CCGGCATGGT CGTCGGCTTC GCGGCCGACG GGCGCGCGGA TCGCGTGATC GGGATCGACG CGTCGGCGAC GCCGGAGAAA ACTCATGCGC AGATCACGCG CATCGCGCGG CATACGGCTG AAATCGTCGA GCTCGGGCGT CGCATCGACG AGCAGGACGT CGTGCTCGAC ACGCGCTACG CGGGCCCGGA ATACGGGCTG CCGAACGACG GCACGCTCGA GGCGATCCGG CTATGCGCAC GGCTCGAAGG CGTACTGACC GATCCCGTCT ATGAAGGCAA GTCGATGCAC GGGATGATCG ACAAGGTGCG GCTCGGCGAA TTCGAGCCGG GCTCGAAGGT GCTGTATGCG CACCTGGGCG GCGTGCCGGC GTTGAGCGCG TATGCGGAGA TTTTCCGCAA CGGTTGA
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Protein sequence | MNLQRFPRYP LTFGPTPIQP LKRLSAHLGG KVKLYAKRED CNSGLAFGGN KTRKLEYLIP DALAQGADTL VSIGGVQSNQ TRQVAAVAAH LGMKCVLVQE HWVNYDDPVY DRVGNIQLSR MMGADVRLVA DGFDIGIRRS WEEAMESVRQ AGGKPYPIPA GCSEHPLGGL GFVGFAEEVR AQEAELGFKF DYIVVCSVTG STQAGMVVGF AADGRADRVI GIDASATPEK THAQITRIAR HTAEIVELGR RIDEQDVVLD TRYAGPEYGL PNDGTLEAIR LCARLEGVLT DPVYEGKSMH GMIDKVRLGE FEPGSKVLYA HLGGVPALSA YAEIFRNG
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