| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3302 |
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| Symbol | |
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| ID | 6179359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 212516 |
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| End bp | 214336 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641683074 |
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| Product | integral membrane sensor hybrid histidine kinase |
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| Protein accession | YP_001809988 |
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| Protein GI | 172062337 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00552774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACACGGC GGCGATGGAA AAACAGAAAA ATCATCCTGA TCCTCGGCTC GCTGTGGATC
ATGGGGTTTG CCGCCTGGGC GTTCCTGCTG TGGGATCTCC TCGCCGCGTC GGTCAACGAG
GGCGTGCTCG AGGGGCCACG CGAAGGCGTG TTCTGGACCG CCGCGCAATA CCGCAACGTC
TATACGCGCT TTGACCGGCA GCTGATTCTC TACGCGACGC GCGAGGACGA CGATTTCGAT
CACGTACAGA TGCAGCTCGA CAGCCTGTCG GTGTCGTTCG GGTTCCTGCA GCGGCCGTCG
GAAGTGTCCG AATACTGGCT GCGCATCCCG CGCGCGCGCA ACGAGATCGA CGCGCTCGGC
GAATTCATGA CGCGCCTGAA GCGCGAGGTG CCGCTGCTGC GCGATTCGCC GAAGCAGGCA
AGGCAGGTGA TCGACGAAGT GAACGCGTAC TGGCCGAAGG TCAACGGCCT CGCGAACTAC
TTCCGCGCGA TCGAAATGGC GCAGCGCGAT TTCACGTTCC ATCAATTGAA GGACAAGCAA
CGCGCGATCC TGATCCTCGG CATCGTGCTC GGCGTGATCC TGTGCGCGCT GTTCCTGCTG
CTGCTCTATA CGATGCGCAC GCGCGACGAC CTGCTCGAAC GGCAAAACGC GGCGCTCGAT
GCGGAACGCA AGGCGTCCGA CCGCGCGTTC GAGATGATCG AGGCGAAGAA TGCGTTCCTC
GGGATGGTCA GCCACGAGCT GCGCACGCCG CTGCAGGCGA TCTGCGGATC GATCGAGATC
CTGCTCGCGC GCCCGCAGTC CGATGCGAAC CTGAAGACTA TCCGGCGGCT GCAGAATTCC
GCGCTGTCGC TGGAAGCGCT CGTCAAGGAC CTCACCGACT ACATCAAGCT GCGCTCGACG
AAGCGCGTCG CCGAACTGGA TACCGTCGGC ATCGCACCGC TGCTCGCCGA AGCGCTCGAG
CCGCTGCGCG AGAAGATCGC GGCCAAGCGG ATCGCGGTCA CGCAGCTCGT CGAGCCGCCC
GGCCTCGCGA TCCGCTCCGA TCGCAAGCTG CTGCGGCAGG TGCTGTCGAA CCTGATCGAG
AACTCGGTCA AGTACACGGT CGGCGGCTCG ATCACGGTGG CGATCACGCT CGCCGACGCG
CCGGCCGGCC AGCAGGTGAA GATCGCCGTG CGCGACACCG GCGCGGGCAT CGCGAAACAG
CATCTGTCTA AGATCTTCGA GCCGTTCTAT CGCGCGAACG ACGCGGTCGG GCTGCACGTC
GACGGGATCG GCATGGGGCT CGCCGTCGTG CGCGAAATCG TCACGACGCT GCGCGGGCAT
GTGGACGTGC GCAGCGTGGT CGGCGAAGGC AGCGAGTTCG TCGTGACGCT GCCGGCCGAA
GTGCCTGGCG TCGATACGGC CGGCACTGCG GCCGGCGACG TGCCCGCGCT GCCGCCCGTG
CTGGCGCATC GCGGCCGGCG CGCGCTGGTG GTCGACGACA ACGACAACGC ACGCGAAACA
CTGGGCGCGA TGCTGTCGGC GCTCGGCATC GACGCCGATC TGTGCGGCAC CGGGCAGGAA
GGCGTTGCGC GCTTCGGTGC GGGCCGCTAC GACGTCGTCG TGCTCGATCT CGAACTGCCG
GACCTGAGCG GATTCGACGT GGCGCAGCGC ATTCGCGCGG TGGCGGAACC CGACGCCGAC
GGCCGGCATC CGGCGATCCT CGGCGTCAGC GCGTATGAAT CGGCCGCGCT GCGCGAGAAC
CAGCGGATGT TCGACGCATT CCTGCCGAAG CCGGTACACC TGCGCGAACT CGGCGCCCTT
GTCGAGAAGC TGCTCGGCTG A
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| Protein sequence | MTRRRWKNRK IILILGSLWI MGFAAWAFLL WDLLAASVNE GVLEGPREGV FWTAAQYRNV
YTRFDRQLIL YATREDDDFD HVQMQLDSLS VSFGFLQRPS EVSEYWLRIP RARNEIDALG
EFMTRLKREV PLLRDSPKQA RQVIDEVNAY WPKVNGLANY FRAIEMAQRD FTFHQLKDKQ
RAILILGIVL GVILCALFLL LLYTMRTRDD LLERQNAALD AERKASDRAF EMIEAKNAFL
GMVSHELRTP LQAICGSIEI LLARPQSDAN LKTIRRLQNS ALSLEALVKD LTDYIKLRST
KRVAELDTVG IAPLLAEALE PLREKIAAKR IAVTQLVEPP GLAIRSDRKL LRQVLSNLIE
NSVKYTVGGS ITVAITLADA PAGQQVKIAV RDTGAGIAKQ HLSKIFEPFY RANDAVGLHV
DGIGMGLAVV REIVTTLRGH VDVRSVVGEG SEFVVTLPAE VPGVDTAGTA AGDVPALPPV
LAHRGRRALV VDDNDNARET LGAMLSALGI DADLCGTGQE GVARFGAGRY DVVVLDLELP
DLSGFDVAQR IRAVAEPDAD GRHPAILGVS AYESAALREN QRMFDAFLPK PVHLRELGAL
VEKLLG
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