Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3288 |
Symbol | |
ID | 6179518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 196457 |
End bp | 199555 |
Gene Length | 3099 bp |
Protein Length | 1032 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641683062 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_001809976 |
Protein GI | 172062325 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.314025 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCAA AGCTCAAGAG ACTTGTTTCG TACCCCGCCG TGGCCGGTCG CAAGCCATTC GAGCCAAGTC GCGTCCGGCG GCAGCAGCAG TTCCTGCTAT ATGCCAGCGG CGCGGCGATC TCGGTGTTCA TTCTGGTGTG CGCGGCGCTC GTATTGCTGC TCGACGTGCA GGAGTCCCTC GAGCGCTTCC GGATCGAGTT CACACGGCGC AGGGCCGAAC TCGTTGCCGA GGTGGCGATC ATGAGGGCAC TCCGGAACCG CTACGTCGAG GACATGGAGC TGCAATGGGC CAGCGTCGTC GAAAATCCGC GAAGCCTGCC CGGGGTACTC GCCGGCAGGC ACGGCAAGCA GACGTTCATC GGGCGGAAGG GGCGAATTGC GATCGCCGCG TTCGCCGACA TCCCGCCGGT CGTATCAGCG AACAGTCACT TGGCTTACCT CGCTCGCTCT CTCGAGCCGG TCGAGTTGAC GGGCGTCCTG CCGCCGCCAC AACCGGCCGA TCCGGGCGGT ACTTCCTATC TGATTGATCC GAACGGCGAT TTCATCGTTG CGGCAGGGCA TCCGTTGGTA AAACGAGCGC TTGCGCTGCC AGGCGGTTTC GATGTAAGGG CCCTCGTCGA GCAATTGCGA CCGGTGACGA ACGATACATC CGTATCGATG GCGCCCGTCG CTCGTCAAAA CACGATGGCG CTTGAGCGGC GATTCGATCC GGTACTCGGA CGCTCCGTGC TGCGGATGGT GCAATGGGTA CTTGGGGCGA ACGGCAGGCC GGTCGTCTGG TTCGTCATCA ACAGCCCGCC GCTGATCGAG GGGATACTGC GCTCGCCGGG TGCCGGCAGG GAATATGCGC TCGTCGATTC CAGCGGAAAT CTCCTGCTTG GCCGGCAACC CGACAGCACG ATGGTGGCTC GCGCGCTCCA GCATGCGCGC CACGACGATG GCGAGCGCGC GGCCGCACAT CGCGTCGGCA TCAACTTCGT CGTCAGCGAC AGGGTACCGA GATCGGACGA GGTGGTGATG GCGACCATCT CGTGGCGTGC CGTTCTGAGC GACGTAGCGT TGCGCGCGAG CCTGACCGTC GCGCCCGCGC TCTTCGCAAT CGCGCTGCTG TGGGTTGCAA TCGTGATGTT CGACCGGCGC GCACTGCGTC CGGCGAATCG GCGCGCGATT CGCCTGATCG AAAGCGAGGC GCTCAACCGC ACGCTGATCC GCACGGCGCC GGCCGGGCTC GTGTTGCTGT CGTTTGCCGA CGGCGAAACG ATCATGCGCA ACGACACGCT GATCGCTTAC GAGCAGGACG TGTCGGGTGA GCCGCTCGGC AAGCGCTTGT GGCGCGCGTA CCGGGACGGC GCGCCCGCCG GCAACGCGCG TACCCGCGTG ACGCGGGAGC TGGCCGTCGA GCGCCCGGGG CATGGCACCG TCTATCTCGA CGCACATATC GTGCGCACCC GGTACCGCGG GATCGACGTG CTGCTGTGCA CGCTGCTCGA CATCACGACC CGCAAGCAGG CGGAGGAGAA GTTGCGCGAG GCGCGCGCGG CCGCCGAGTT CGCGAACAAG GCGAAGTCGA CGTTCCTCGC GACGATGAGC CACGAGATCC GCACGCCGCT CAACGCGATC ATCGGCAACC TGGAACTGAT GGAGCGCGCG CAGATGGCGG TGCCGCTGCG GCGCCGGCTG GGGACGATCA TGTCGTCGTC CGATGCGCTG CTGCGCGTGA TCAACGACGT GCTCGACCTG TCGAAGGCCG AGTCGAACCA GATGGTGCTG GAAAGCATTC CGTTCGACCT GCGGCGTGTC GTGAACGACG TGGCCGCGAT CTTCCGCCCG CTCGCGGATG CGAAAAACCT TGCGCTGACG TGCCGCATCG CGCCGGATCT CGCCAACGGT TACGTGGGCG ATTCGACCCG GCTGCGGCAA CTGGTGTCGA ACCTCGTCAG CAATGCGATC AAGTTTACGA AGCGCGGCGG CGTGACGATC GACGTGCGGC TTGCAAAGGC GGGCCCGGCC GGCCGTGGCG TCGAAATCGC AGTCAGCGAT ACGGGCATCG GCATTCCCGA AGACAGCCTG CCGACGCTGT TCGACGTCTA CGTCCAGACC GATGCGTCGA TCTACCGGCG CTTCGGCGGC ACGGGGCTCG GGCTGCCGCT GTGCCGACGC ATCGTGACGC TGATGGGTGG GGCGCTGAAT GTCGACAGCC GTCTCGGCGA AGGCACGATT TTCGTGGCTG CGTTGCCGTT GCCCGAAGCT CAGTCCGGCT GGCAAGACGA TGCGCCGGAA CCCGCGGCGC TCGCGGATGC CGTGCGCGGG TACGGAGCAG AGGCGGAATC CGAAACGGGT GCGGAGGCTG ACGCACGCGC GGAGGCCGAC GATGGCGAAC CGCTGCGCGT GCTCGTCGCC GAGGATCATC CGGCAAGCCG GGCGTTGCTG CGCGACCAGG TCGACGCGTT GGGCTACGAC GCGACGATCG TTTCGAACGG CATCGAGGCG ATGCGCGCCT TCTTCGAGCG ACCGTACGAC GTCGTGCTGA CCGATCTCGG CATGCCTGAA CTCGACGGCT TCGCGCTGGC GAATTTTCTC CGCGAACAGG GCGCGAAGGT GCCGGTGATC GCGATGACCG CGCACGCGAC AGACGAGGAT CGCCGGCGTT GCGAACAGGC CGGCGCTGTG GAGATCGTGC TCAAGCCGTT GTCGATCGAG ATGCTCGACG CGGCGTTGCG GCGGCATGCG GGGCGCGATG TGGCGTCGCC GCGACCGGCG CGCGCGCACG CGCCGGTCGC GGCCGCAATG ACCGACGAAG TGCGGCGCAC GCTGCACGAG ACGACGCTGC ATTCTCTCGC GGCGATCGGC GACGCGCTCG CGAGCGGCGA CGCGGATACG CTGCACATCG AGCTGCATTC GATGCGCGGC GGCTTCGCGC TGGCGGGCGA CACGGACGCG CGCGACGCGT GTGCAAGCGC CGAGCGGGCG ATGGCCGACG GAGGTCCGGA CGACGTCCGG CGTATTTGGC CGGACGTCGA AGCTGCAATC GAGCAAGCAC TCGACCGCTT GCGCCTGCCT GGCCCGAACG AGGGGGCTGC TACTGATACG AAAACGTAA
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Protein sequence | MPAKLKRLVS YPAVAGRKPF EPSRVRRQQQ FLLYASGAAI SVFILVCAAL VLLLDVQESL ERFRIEFTRR RAELVAEVAI MRALRNRYVE DMELQWASVV ENPRSLPGVL AGRHGKQTFI GRKGRIAIAA FADIPPVVSA NSHLAYLARS LEPVELTGVL PPPQPADPGG TSYLIDPNGD FIVAAGHPLV KRALALPGGF DVRALVEQLR PVTNDTSVSM APVARQNTMA LERRFDPVLG RSVLRMVQWV LGANGRPVVW FVINSPPLIE GILRSPGAGR EYALVDSSGN LLLGRQPDST MVARALQHAR HDDGERAAAH RVGINFVVSD RVPRSDEVVM ATISWRAVLS DVALRASLTV APALFAIALL WVAIVMFDRR ALRPANRRAI RLIESEALNR TLIRTAPAGL VLLSFADGET IMRNDTLIAY EQDVSGEPLG KRLWRAYRDG APAGNARTRV TRELAVERPG HGTVYLDAHI VRTRYRGIDV LLCTLLDITT RKQAEEKLRE ARAAAEFANK AKSTFLATMS HEIRTPLNAI IGNLELMERA QMAVPLRRRL GTIMSSSDAL LRVINDVLDL SKAESNQMVL ESIPFDLRRV VNDVAAIFRP LADAKNLALT CRIAPDLANG YVGDSTRLRQ LVSNLVSNAI KFTKRGGVTI DVRLAKAGPA GRGVEIAVSD TGIGIPEDSL PTLFDVYVQT DASIYRRFGG TGLGLPLCRR IVTLMGGALN VDSRLGEGTI FVAALPLPEA QSGWQDDAPE PAALADAVRG YGAEAESETG AEADARAEAD DGEPLRVLVA EDHPASRALL RDQVDALGYD ATIVSNGIEA MRAFFERPYD VVLTDLGMPE LDGFALANFL REQGAKVPVI AMTAHATDED RRRCEQAGAV EIVLKPLSIE MLDAALRRHA GRDVASPRPA RAHAPVAAAM TDEVRRTLHE TTLHSLAAIG DALASGDADT LHIELHSMRG GFALAGDTDA RDACASAERA MADGGPDDVR RIWPDVEAAI EQALDRLRLP GPNEGAATDT KT
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