Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3285 |
Symbol | |
ID | 6179232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 191881 |
End bp | 194985 |
Gene Length | 3105 bp |
Protein Length | 1034 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641683059 |
Product | integral membrane sensor hybrid histidine kinase |
Protein accession | YP_001809973 |
Protein GI | 172062322 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.347424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.554381 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCAGA GCCCGCTTCA ATCCCTTCGT CGCTATCAGA GCATTTCGGT GTTCGGTGGC GGTATCGTCG TCACCATCCT TGTCCTGATC GCTTGCGGTC TCGGGATGGC ATCGATCGTC TCGGGCTATG TCGAGGGGCA GCGGCGCAAC TACCTGAACG GCCTGGAGCA GACGCTGAAC GAAATCCAGG TAAGCGAAAC CTCGTTCCGC AACGGCGTCG CGAATGCGCA ATTGATCTGG CAGGAGGCCG ATGACGCGCC CGCGGCGGTT GTCGACGAAT TCTTCCTCAA CGACCAGCGC GTCGCGACCC GTCCGCATCC GTCGCTCGTC GTCGGCGTGC CTGCGCGTAA CAGCGATCGG GCTGAAGTCG CGCGCTATCT GTCGCTGTCG GTCCTGTTGG CACGCATCTG CGCGGCCAGT TCGCTCAATC GCGGCCGCAC GCTGGAGGGT TACCACTACA GCACGCGCAC GGGCTTGTTC GCGCTGATAC CTCATCGGGA TCGCGACGAT CCGGCGCTGG TTTCGCCGGA AAGCCGCGCA CGTGTGCTGG ATGCGCTGCG CGTCGATTTC GAGCGCCCGT ATCCGGACAT CGTCGATGCC CGCCCGCACG TGCGCTGGCT GCCGCCGTTC ATCGATCCCG TATCGGGGCA ATCGCGCATC CGGCTCGCGG CCGAGGCGCG TGACAATGGC CAGCCGTTCG CGGTGCTCGT CACAGAATAT CCGCGCGATT ACCTGCTGTC CTGGCTCGCC GACTATCGCC CCGAAGGCAT GTTCTACATC ACGACGGCCG ATGGCGAGCT CGTCACGATG GATCCCACTG CGGACGGCTC CGGCCGCGTG GAAAGCCTGC TGAAGCTGAT CCCGTGGCGG GGCGGCGCGT CGTCGTCGAG CGCGCCCGTG TTCCGGGACG GCTTCCTGCT GTTTCACGGC AAGCTGGAAT CGACGGGTTG GACGCTTGCG TATGCGCTGT CGTGGACCGA CATCGCGGCC GGCGTCGCGC GCTCGGCCGG TACGCTCGGC GCCGCGACAC TGCTCGCACT CATGGTCATG TGGGGGCTGC TGCTGCGCTT TCATCGGCGG GAGTTCGTGC CGCTCTACGC GCGCTCGCAG CGTGTGTTCG ACAGCGAAGC GCTGTGCCGC AGCGTGATCG AGATGGCGCC GATCGGACTC GGGCTGATCG CGCGCGACGA CGGGCATTTC ATGCTCGTGA GCCCCGCGCT GACGGACATG GTCGAGCGGA TCGGCGGCGA CTATCACGTG CTGTCGAGCC AGGTGGCCGA CGCATGGCAG GCGCGCGGCC ACGCGGGCGG CGTGCTGTAC GGCGACCTTC GGGTGGGAGA CGTGCAAGCC GTGGACCTGC ACCTCGAATT CATCGCGTGT GGCGCCCGCT ATCAGGGCAA GGATGTGCTG ATCGCCGCTG TCGCCGACAT GACCGCGAAG CGGCAACTCG TGCAGCAGCT GGAAGAGGCC GTGCGCGCGG CCGATTCGGC CAATGCGGCG AAATCGTCGT TCCTCGCGGC GATGAGCCAT GAGATCCGTA CGCCGCTGAA CGTGATTCTC GGCAACCTCG AACTGCTCGA GCGCTCGGCG CTCGACGCGA CCCAGCATGG TCGCGTTCGT ACGCTGCACG CGTCCGCGAC GAGCCTGCTC GCGCTCGTCA GCGACATTCT CGATTTCTCC AAGATCGAGG CCGGTGCGAT GTCGGTCGAA TCGATCGAGT TCGACGTGAT CGAGACGGTC GAGCGCGAAC TGCACGCGTT CGCGACGATC GCGAAGGCAA AAGGATTGCA ACTATTCTGC GAGATCCATG CGTGCGGCAC GCAGCGAATG CGAGGCGATC CGACGCGGCT CGCGCAGGTG CTCCGCAACC TGCTGAGCAA TGCGCTCAAG TTTACCGCCG TCGGTCGCGT AACCGTGCGC GTCGCGGTCG TTGTCGAAGG GCATGACGCG CCGGAACTGT CGATCGAGGT CGAGGACACC GGCATCGGAA TTGGCGCCGA ACATCGACGC AAGCTGTTCA AGGCATTTTC GCAGGTCGAC GCGTCCATTA CGCGGCGTTA CGGCGGCACC GGGCTCGGGC TTGCGCTGTG TGACCGGCTC GTCGCGGCGA TGGCTGGCCG CATCGCGGTG GAGAGCGAGG CGGGCGTCGG CAGCCGTTTC AAGGTGCTTC TGCCGCTCGG CATGGACATC GCCGCGCTCG ACCCGCCGCG CGCGGCTCAC GCCCACGCGC TGGCGCTGAT TGCCGCGCAT CCCGAATGGT GCGATTTTGC ATTGCCGCAT CTACATGCGT GGGGATTCGA TGTCAGCGTG TACGACAGCC CGTCGAGTCT GCCGGCCGGC ATTGCACGAC ACGGCGCGGT CGTGCTGTTC GGCGATTCCG ATACATGGTC GCAAGCGGAT CTGCACAGCC TGAGCGATTG TGCGCCGCTG ATACTCGCGA TACCCGACGG TCCGCTCGAA CCGTATCGCG CGGGCGCCAC CGTACGCGTG TCGAGTTACT CGCTCCGCGG CCTGCGCGCC GCGTTGGCGC TGGGCGGCCA GATGGGCGAC GAAAGCAGGA TCGATGCCGT ATCGGGCGAC GACCCGCGGC GTGACGATTC GCATGCTCGC GATTCGGCAA CCGTCACCGC ATCGCACGAC ACGGCCGCGC ACGGAAGTTG CACATTGCGC GTGCTTGTCG CGGACGATGA AACCATCCAC GGCTCGATTT TCAGCGAGCA ATTGTGCGCG CTCGGCTGCA CGGCAGCCGA GGTCGGATCG GGGCGCGCGG CGCTCGAATC TCTGGCCAGC GGCGACTGGG ACGTGCTGCT GATCGGCGAC GATCTGCCCG ACATGCGCGC GCACCAGCTG GCCGAAGCGG CACGCGGCGT CGATGCCGCG TGCGACGTAC TGGTCGTGAC GTCACATGTG ACACCCGAGG GCATGCACCG CTGCACGACA GCCGGTGTCC GACGCGTATT GACGAAACCC GTGACGCTCG GCCACCTGCG CGGCGCGCTT GCGCATGCGC GGCAGCGCCG TGCCGCGACT TCGGCGAAGG AGTCGTGCGC GGCCATGTGC ACATCGAGAT CAACCAATCA TGAAACGGCT TTGCATGACA AGTAA
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Protein sequence | MSQSPLQSLR RYQSISVFGG GIVVTILVLI ACGLGMASIV SGYVEGQRRN YLNGLEQTLN EIQVSETSFR NGVANAQLIW QEADDAPAAV VDEFFLNDQR VATRPHPSLV VGVPARNSDR AEVARYLSLS VLLARICAAS SLNRGRTLEG YHYSTRTGLF ALIPHRDRDD PALVSPESRA RVLDALRVDF ERPYPDIVDA RPHVRWLPPF IDPVSGQSRI RLAAEARDNG QPFAVLVTEY PRDYLLSWLA DYRPEGMFYI TTADGELVTM DPTADGSGRV ESLLKLIPWR GGASSSSAPV FRDGFLLFHG KLESTGWTLA YALSWTDIAA GVARSAGTLG AATLLALMVM WGLLLRFHRR EFVPLYARSQ RVFDSEALCR SVIEMAPIGL GLIARDDGHF MLVSPALTDM VERIGGDYHV LSSQVADAWQ ARGHAGGVLY GDLRVGDVQA VDLHLEFIAC GARYQGKDVL IAAVADMTAK RQLVQQLEEA VRAADSANAA KSSFLAAMSH EIRTPLNVIL GNLELLERSA LDATQHGRVR TLHASATSLL ALVSDILDFS KIEAGAMSVE SIEFDVIETV ERELHAFATI AKAKGLQLFC EIHACGTQRM RGDPTRLAQV LRNLLSNALK FTAVGRVTVR VAVVVEGHDA PELSIEVEDT GIGIGAEHRR KLFKAFSQVD ASITRRYGGT GLGLALCDRL VAAMAGRIAV ESEAGVGSRF KVLLPLGMDI AALDPPRAAH AHALALIAAH PEWCDFALPH LHAWGFDVSV YDSPSSLPAG IARHGAVVLF GDSDTWSQAD LHSLSDCAPL ILAIPDGPLE PYRAGATVRV SSYSLRGLRA ALALGGQMGD ESRIDAVSGD DPRRDDSHAR DSATVTASHD TAAHGSCTLR VLVADDETIH GSIFSEQLCA LGCTAAEVGS GRAALESLAS GDWDVLLIGD DLPDMRAHQL AEAARGVDAA CDVLVVTSHV TPEGMHRCTT AGVRRVLTKP VTLGHLRGAL AHARQRRAAT SAKESCAAMC TSRSTNHETA LHDK
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