Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3284 |
Symbol | |
ID | 6179231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 187941 |
End bp | 191354 |
Gene Length | 3414 bp |
Protein Length | 1137 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641683058 |
Product | filamentous haemagglutinin outer membrane protein |
Protein accession | YP_001809972 |
Protein GI | 172062321 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.934286 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGG CCTATTCATT GGTGTGGAAT GAAGCACAGG GTGGCTGGTG CGCAGTCGGG GAAACGGCGC GCCGGCGCGG CAAGAAGAGC GGCGGCAAGC GCCTGCTTGC GGCGGGTGTG TCGCTGTTGG GGCTGGCGGC CGCGTCGGGC GCGTATGCGT TGCCGACGGG TGGCGAGATT GCGTCGGGTA AGGCGGACAT CGCGACGTCG ACGGATGGCA AGACGATGTC GATCAACCAG CACACGGACA AGCTGATCAC GAACTGGCAG GACTTCAGCG TGGGTGGCGG CGAGCGGGTG TCGTTCCAGC AGCCGACGAA CCAGTCGATC GCGCTGAACC GGGTGATCGG GGCGAACGGC AGCCAGATTC AAGGTCAACT GGACGCGAAC GGGCGCGTGT TCCTGGTGAA CCCGAACGGC GTGATGTTCG GCGCGGGCGC GCAGGTGAAC GTGGGCGGCC TGGTGGCGTC GACGCAAAAC CTGTCGGACG CTGATTTCCT GGCCGGTCGC TACCGGTTCG CGGGCACATC GGGCCAGTCG GTGGAGAACG CCGGGACGAT CACGGCGGCG GACGGTGGGA GCGTGGCGCT GCTGGGTGCG CGGGTGTCGA ACACGGGCGT GATTCGCGCG CAGATGGGCC GCGTGGCGTT GGGCGCGGGC AATGCATTCA ACGTGAACTT CGACGGCAAC GGGCTGCTGA ACCTTCAGGT CGAAGGTGGG GCGGTGGACG CGCAGGCGCA CAACGGCGGG CTGCTGAAGG CGGACGGCGG GGAAGTGCTG ATGACGGCGC GCGCGGCAGG CGATCTGCTG GGCTCGGTGG TCAGGAACAG CGGCACGATC GAGGCGAAGG GGCTGAGCAG CCGCGCGGGG AAGATCACGC TGGACGGCGG CGAGGTTCAG GTCGGCGGGA AGCTGGACGC GAGCGCGCAG GACGCAGCGA CGGCAGGCGG CACGGTGACG ACGCGCGGCG AGCGGGTGGC GGTGTCGCGT GACGCGCAGG TGGATACGCG CGCGGCGTCG GGCCAAACGG GCCAGTGGGC GATCGAAGCG GCCAACGCCG GGGTCGGCGG TAACGCCGCG ATCGACGGCG AGACGCTGTC GCGCAACCTG GGCACGACGA ACGTGGCGCT GACCAACACG TCGGGCGACC TGACGGTGGG CGACGCGGTG AACTGGGCAA GCGACAACGC GCTGGCGCTG ACGTCGAAAA AGGGCAGCGT CAACCTGAAT CAGTCGCTGA CGGCGAGCGG CGCGAACGCG GGCGTGACGA TGAACGCGGC GCAACAGATT CGCGTCGGCA ACAAGGTGAC GCTGACGGGC GAAAACGCGA GCCTGGCGTT GAACGCGGGC AGCGGCCATA CGCTGACGAA CGACGATGCG GTGGTGACGC TGTCGGGTCG CAATGCGTCG TTCTCGGCGA ATGGCGAAGC GTATGACGTG ATTCACGATC TCGCGGGGCT GCGCGGTGTC GACGGCAACA TGAACGGCCG TTACGTGCTG GGCAATGCGA TCGACGGCAA GGGTGCGCAA TTCCGCAGCC TCGGCGGCAA CCGTGCGATG TTCGGCGGTG TGTTCGACGG TCTGGGCAAT ACCATCGGCA ATCTGTCGGT CTCGAATCCC GGTAGCGCGA CTGTCGGGTT GTTTGCGGTC AACGGCGGCC GTATCTCCAA CCTCGTACTG GACAAAATCA CGGCGCGCGG CCTGGTCGGG CAAGTCGTCT CGCCGATCAG CGTCGGCGCA TTGGCCGGCT ACAACGTAGG TGACATCACG AACGTGAAGG CGAAAGACGT CGTGGTGAGC GGCGAGGGCC GCGCGATCGT CGGTGGTCTC GTCGGCAGCA ACCTGAGCGG ACGGATCGAT CGCGCATCCG TTTCGGGCCG CGTCGAAGGC GGCAAGGAGG CGATGTATGT CGGCGGCCTG GCTGGAGAAA ACCGCACGTT CCTTTCGCCG AATCGTGGCG AGGCGACCGT CAGCAACAGC CACGCCGACG TACAGGTCAG CAGCAGGTCG TCCGGCGTTA CGGGCGGCCT GGTCGGTATC AACCGGGGCG CCATCACGGC GTCGACGGCC GCGGGCAGCG TCAGCGCCCT GGCCCGCGGC GCGCGCGCCG GCGGCCTCGT CGGCTACCAT GAAGGCGGGA GCATCAAGGC ATCCTCGTCG TCCGCGAGCG TGCGGGCTGG CCATGACGCG ACGGCGGGCG GGCTCGTCGG CTACAACGCC GCGTCGATCG AGGCATCCGA CGCGACCGGC GGCGTGACCG TGGGCGACAA TGCCAAGGCG GGCGGCCTGG TCGGGGAGAA TGTCGGCAAG ATCGCCGCGT CGACGGCGGG TGGCAATGTC GTTGCAGGCA AGTCGGCCAT CGTCGGCGGG CTCGCCGGCG TCAACCGTGC GACGATCCTG GCGTCGACGG CGAACGGCGG CGTTCAGGCC GGTAACGCCG CGGTGGCGGG CGGGCTCGTG GGATATAACG CGGGCACGGT TCGCGCATCC ACCGCGAACG GCAAGGTCTC GACAGGCGCC GACAGCGAAC TGGGCGGCCT CGTCGGCCGT AACGGCGTCC TCGGCCAGGT GATCGCGTCG AGCGCGAACG GCAACGTGGA CGGGCGCGAC AACGTGAAGG CCGGCGGGTT GGTCGGCTTG AACGACGGTG CGATTGACGG TTCGTCGGCC ACGGGGACGG TCAAGGTCGG CGCGCGGAGC GTGGCGGGCG GCCTGGTCGG CGTCAACACC GAAAGCGTGA AGTCGTCCGA TGCACACGGT CCGGTCATTG CCGGCGTATC GAGCACCGTG GGCGGCCTCG TCGGCGAGAA CAGCGGCGAG GTGGTCGCTT CCTCGGCGGC CGGCAGTGTA TCGACTGCTG CGAACGGCAT CGCAGGCGGG CTCGTCGGCA AGAACGCGGG CAAGGTGGCG AATGCCAATG CGCGCGGGAG CGTCAACATT GCCGGTACGG GCAGCGCTGG CGGCCTGGTC GGGCGCAACG AAGGCAGCGT GTCGTCGTCG AGCGCGACGG GCGACGTCGT CGCGGGCGCC GATAGCTACG TCGGCGGTCT GGTCGGGCAG AGCGTCATGA GCGCATCGAT CGATGCGTCC GACGCCTCCG GTTCCGCGAA GGGCGGGGAT TGGAGTAATG TCGGCGGCCT CGTCGGCGAA AACGACGGCA AGGTCGCATC GTCGTCGTCG TCAGGTACCG TGTCCGGCGG GCGCGGTTCC CGCCTGGGCG GCGTGGCAGG CTCAAACTTC GGCAACGTCG ATCGTTCGAG CTCGAGCAGC CGTATTGCCT ACACGGCTGG CTATGACCAG TTGTACGGCG GGCTGGTCGG CCTCAACTTC GGCTGGATGC AAGGCAATAG CGTGAGCGGA AGCGCGGCGG CGGTGCGGCT CGCGGGCTTC GATTTCGGCG AAATCCGGAA CTGA
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Protein sequence | MNKAYSLVWN EAQGGWCAVG ETARRRGKKS GGKRLLAAGV SLLGLAAASG AYALPTGGEI ASGKADIATS TDGKTMSINQ HTDKLITNWQ DFSVGGGERV SFQQPTNQSI ALNRVIGANG SQIQGQLDAN GRVFLVNPNG VMFGAGAQVN VGGLVASTQN LSDADFLAGR YRFAGTSGQS VENAGTITAA DGGSVALLGA RVSNTGVIRA QMGRVALGAG NAFNVNFDGN GLLNLQVEGG AVDAQAHNGG LLKADGGEVL MTARAAGDLL GSVVRNSGTI EAKGLSSRAG KITLDGGEVQ VGGKLDASAQ DAATAGGTVT TRGERVAVSR DAQVDTRAAS GQTGQWAIEA ANAGVGGNAA IDGETLSRNL GTTNVALTNT SGDLTVGDAV NWASDNALAL TSKKGSVNLN QSLTASGANA GVTMNAAQQI RVGNKVTLTG ENASLALNAG SGHTLTNDDA VVTLSGRNAS FSANGEAYDV IHDLAGLRGV DGNMNGRYVL GNAIDGKGAQ FRSLGGNRAM FGGVFDGLGN TIGNLSVSNP GSATVGLFAV NGGRISNLVL DKITARGLVG QVVSPISVGA LAGYNVGDIT NVKAKDVVVS GEGRAIVGGL VGSNLSGRID RASVSGRVEG GKEAMYVGGL AGENRTFLSP NRGEATVSNS HADVQVSSRS SGVTGGLVGI NRGAITASTA AGSVSALARG ARAGGLVGYH EGGSIKASSS SASVRAGHDA TAGGLVGYNA ASIEASDATG GVTVGDNAKA GGLVGENVGK IAASTAGGNV VAGKSAIVGG LAGVNRATIL ASTANGGVQA GNAAVAGGLV GYNAGTVRAS TANGKVSTGA DSELGGLVGR NGVLGQVIAS SANGNVDGRD NVKAGGLVGL NDGAIDGSSA TGTVKVGARS VAGGLVGVNT ESVKSSDAHG PVIAGVSSTV GGLVGENSGE VVASSAAGSV STAANGIAGG LVGKNAGKVA NANARGSVNI AGTGSAGGLV GRNEGSVSSS SATGDVVAGA DSYVGGLVGQ SVMSASIDAS DASGSAKGGD WSNVGGLVGE NDGKVASSSS SGTVSGGRGS RLGGVAGSNF GNVDRSSSSS RIAYTAGYDQ LYGGLVGLNF GWMQGNSVSG SAAAVRLAGF DFGEIRN
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