| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3274 |
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| Symbol | |
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| ID | 6180005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 179928 |
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| End bp | 180749 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641683048 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001809962 |
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| Protein GI | 172062311 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCGC CGCATCCGCC GATGAATGCC CCGATTTCCG AAACGGAACC TGAAACCGAA
ACCATCGCCG AGCCACGCGC GTCGCGCGTG CATCGGCCTG TCGCGCTCGT CACCGGATCG
ACGTCGGGGA TCGGCGCGGC CATCGCACGA CGCCTGTCGG CGGATGGCTA TGCGGTGATC
CTGCATTCGC GCAGCTCCGC CGACACCGGC CGCGCAATGG CGGCCGAGCT CGGCGCGAGC
TACGTGCAGG CCGATCTCGC CGACGATGCG CAACGCGTGC GGTTGATCCG TGATGCGCTC
GCGGTGCACG GGCGGCTCGA CGTGCTGGTC AACAACGCGG GCGCGAGCCG CGTGATTCCG
CACGAGGATC TCGCCGCCGC GACGGCCGAC GTGTGGCGCG AGATGCACGA GATCAACGTG
ATCGCGCCGT TCCGGCTCGT CGCCGAGGCG CAGCCCGCGC TGCTCGAAGC GGCGTCGAGC
GGGCGCGCCG GGTGCGTGAT CAACGTCAGC TCGCATGCGG GCGTGCGGCC GAAGGGCGCG
TCGATTCCGT ACGCGGCCGC GAAGGCCGCG CTCAATCACA CGACGCGCCT GCTCGCGCGC
ACGCTCGCGC CGGCGATTCG CGTCAACGCG GTGGCGCCGG GGCTCGTCGA TACGCCGCTG
ACGGCCGACT GGACCGAAGC GCAGCAGCTC TGGCACGAGC GTGCGCCGAT GCGCCGTGCG
GCGACGCCGG ACGACGTCGC GCAGACGGTC GCGATGCTCG TCGCGTCCGA CTACGTGACG
GGCGAGATCG TGATGCTCGA CGGGGGAATG AACTTGACGT GA
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| Protein sequence | MDAPHPPMNA PISETEPETE TIAEPRASRV HRPVALVTGS TSGIGAAIAR RLSADGYAVI
LHSRSSADTG RAMAAELGAS YVQADLADDA QRVRLIRDAL AVHGRLDVLV NNAGASRVIP
HEDLAAATAD VWREMHEINV IAPFRLVAEA QPALLEAASS GRAGCVINVS SHAGVRPKGA
SIPYAAAKAA LNHTTRLLAR TLAPAIRVNA VAPGLVDTPL TADWTEAQQL WHERAPMRRA
ATPDDVAQTV AMLVASDYVT GEIVMLDGGM NLT
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