Gene BamMC406_3273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3273 
Symbol 
ID6180004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp179391 
End bp179858 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content63% 
IMG OID641683047 
Productcupin 2 domain-containing protein 
Protein accessionYP_001809961 
Protein GI172062310 
COG category[S] Function unknown 
COG ID[COG3837] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACGA CACCTCCCCG GGAACTGCTG AAAGCTGCCG ACATCGCGAA GATGGAACCG 
ACGCGCGCGG TGCATTCGCT GAATCCCAAT GCCGTTCGCC TCAAAAGGCA GCTCAGCGAC
CTGACCGGCC TCACGCAAAT CGGCGCTCAC CTGCTCACGC TGATGCCCGG TCACGAATCG
GCCGAATATC ACCGTCACCT GTACGAGGAA GAATGCGTGT ACGTGCTGTC CGGCACCGGC
ACGGCCACGA TCGGTGAACG CGCTGTCGAC ATCGGGCCGG GCGATTTTCT CGGCTTTCCG
CGCGGCGGCG ACGCGCACAC GTTGCAGAAT ACCGGCGACG TGCCGCTGCA ACTGTTCATC
GCCGGCCAGC GCCTCGAACA CGACGTGTGC GAATACCCGA GAATCGGCAA ACGGCTTTAC
ATCGCCGGCG AACTCGAGGA TTTCGTCGAT CTGCCGAAAC GGCCGTAG
 
Protein sequence
MSTTPPRELL KAADIAKMEP TRAVHSLNPN AVRLKRQLSD LTGLTQIGAH LLTLMPGHES 
AEYHRHLYEE ECVYVLSGTG TATIGERAVD IGPGDFLGFP RGGDAHTLQN TGDVPLQLFI
AGQRLEHDVC EYPRIGKRLY IAGELEDFVD LPKRP