Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3273 |
Symbol | |
ID | 6180004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 179391 |
End bp | 179858 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641683047 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001809961 |
Protein GI | 172062310 |
COG category | [S] Function unknown |
COG ID | [COG3837] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACGA CACCTCCCCG GGAACTGCTG AAAGCTGCCG ACATCGCGAA GATGGAACCG ACGCGCGCGG TGCATTCGCT GAATCCCAAT GCCGTTCGCC TCAAAAGGCA GCTCAGCGAC CTGACCGGCC TCACGCAAAT CGGCGCTCAC CTGCTCACGC TGATGCCCGG TCACGAATCG GCCGAATATC ACCGTCACCT GTACGAGGAA GAATGCGTGT ACGTGCTGTC CGGCACCGGC ACGGCCACGA TCGGTGAACG CGCTGTCGAC ATCGGGCCGG GCGATTTTCT CGGCTTTCCG CGCGGCGGCG ACGCGCACAC GTTGCAGAAT ACCGGCGACG TGCCGCTGCA ACTGTTCATC GCCGGCCAGC GCCTCGAACA CGACGTGTGC GAATACCCGA GAATCGGCAA ACGGCTTTAC ATCGCCGGCG AACTCGAGGA TTTCGTCGAT CTGCCGAAAC GGCCGTAG
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Protein sequence | MSTTPPRELL KAADIAKMEP TRAVHSLNPN AVRLKRQLSD LTGLTQIGAH LLTLMPGHES AEYHRHLYEE ECVYVLSGTG TATIGERAVD IGPGDFLGFP RGGDAHTLQN TGDVPLQLFI AGQRLEHDVC EYPRIGKRLY IAGELEDFVD LPKRP
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