| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3271 |
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| Symbol | |
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| ID | 6179588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 177095 |
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| End bp | 178447 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641683045 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_001809959 |
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| Protein GI | 172062308 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAAC TCGCCCTGCT GGCAGACGCT GACCGGCGCG CGCATGCGTA TCTCGCCGCG
ACGGACGAAC GGCGCGCGTA TCCCGACGCG GCCGCGCTCG CCGGTCTTGC GGCGTTCGAC
GAGCCGCTGC CCGACACAGG CCGTCCGGCC GACGACGTGT TGCGCCTGCT CGACGAGCGC
GGCACACCCG CGACCGTCGC GTCGAACGGC CCGAACTACT TCGGCTTCGT GATCGGCGCG
ACGCTGCCGG CCGCGGCGGC GGCAGAGCGG CTGATGCTCG CGTGGGACCA GTGCGCGTCG
TCGTTCGCCA ATTCGCCGGT GGCCGCGACG ATCGAGCGGC AGGCCGCGCG CTGGATCGTC
GACGTGCTCG GGCTGCCCGA GGGCAGCGCG GTCGGCTTCG GCACGAGCGC GACGGCCTGC
ACGCTCGTCG CGCTGGTCGT CGCGCGGCGT GCGCTGCTCG CGCGCAAGGG CTGGGACGTC
GACGAGGACG GCCTGGTCGG CGCGCCCGAG GTCAAGGTGG TGGTCTCCGA GCTCGTGCAC
GTCACGGTGA AGAAGGCGCT GCGCGTGCTC GGCTTCGGAT TGACGCGTGT GATCGTCGCG
CCGGTCGACG CGCATGGCCG CATCGATCCC GCGCAGGTGC CGCCGCTCGA CGACATGACG
ATCCTCTGCG TGCAGGCCGG CGAAGTGAAC ACCGGCGAAT TCGATCCGTT CGCGGCGCTG
ATTCCGCCCG CGAAGGCTGC CGGCGCGTGG GTGCACGTGG ACGGCGCGTT CGGGCTGTGG
GCGCGCGCGT CGTCGAAGCG CGCGCTGACC AACGGCGTCG ACGGCGCGGA TAGCTGGACG
ACCGACGGCC ATAAATGGCT CAACACACCG TACGACGGCG CGATGGTGAT CTGCCGCGAC
GCGGCCGCGC TCGCGAGCGC GATGAACAGC GACGCCGTCT ATCTGAGCGG CGCGCAGGAC
GCGCAGAAGA ATCTGAACCT CGAATTCTCG CGGCGCGCGC GCGGCATTCC GGTGTGGGCC
GCGCTGCGCG CGCTCGGCCG CGCCGGTGTG GCGACGATGA TCGAGCGGCA TTGCGCGCAG
GCCGCGCGCG TCGCGGATGG CCTGCGCGTG GCCGGCTACG ACGTGCTGAA CCGCGTCGTG
CTGAATCAGG TGCTCGTGCG CGCCGGCACC GACGACGAGA CGACCGCGAT CCTTCAGGCC
GCGCAGGATT CGGGCGATGT GTGGTTCGGG CAGACGGTTT GGCAGGGGCG GCCGGCGTTC
CGGATCAGCG TGTCGTCGTG GCGCACGGAG GACGAACACA TCGATCGTCT CGTCGCGTTG
CTGACGAAGC TGCGCGGCGT GCAGGTGCGT TGA
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| Protein sequence | MDELALLADA DRRAHAYLAA TDERRAYPDA AALAGLAAFD EPLPDTGRPA DDVLRLLDER
GTPATVASNG PNYFGFVIGA TLPAAAAAER LMLAWDQCAS SFANSPVAAT IERQAARWIV
DVLGLPEGSA VGFGTSATAC TLVALVVARR ALLARKGWDV DEDGLVGAPE VKVVVSELVH
VTVKKALRVL GFGLTRVIVA PVDAHGRIDP AQVPPLDDMT ILCVQAGEVN TGEFDPFAAL
IPPAKAAGAW VHVDGAFGLW ARASSKRALT NGVDGADSWT TDGHKWLNTP YDGAMVICRD
AAALASAMNS DAVYLSGAQD AQKNLNLEFS RRARGIPVWA ALRALGRAGV ATMIERHCAQ
AARVADGLRV AGYDVLNRVV LNQVLVRAGT DDETTAILQA AQDSGDVWFG QTVWQGRPAF
RISVSSWRTE DEHIDRLVAL LTKLRGVQVR
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