Gene BamMC406_3253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3253 
Symbol 
ID6180268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp160370 
End bp160858 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content65% 
IMG OID641683028 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001809942 
Protein GI172062291 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.723114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.861381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAA ATCGCGCTTC GGTGGAACTG GACGGTGTCG ACCGCGCGAT GCTCCGCCTG 
CTGCAGGAAG ACGGCGCGCT GTCGAACGCG ACGCTCGGCG AGAAGCTGTC GCTGAGCGTC
ACGCCGTGCT GGCGCCGCCG CAAGCGGCTC GAGGACGAGC ACGTGATCAC CGGCTACCAG
GCGAACCTCG ACCGGCGCGC GCTCGGCATG AACGTGTTCG CGTTCGTGCA GATCACGTTC
AACATGCATT CGGACCAGGA TCCGGATCAC TTCGAGGAGG TGATGCGGCG TCACGACGAA
GTGACGTCGT GCCACAAGAT CACCGGCGCG GCCGACTACA TCCTGCAGAT CGTCGCGGCC
GATCTCGACG CGTACTCGGA ATTCGTCGAA CGCGTGCTGA GGAAGCAGGC CGGCGTGTCG
TCGATCCAGT CGAGCCTCGC GCTGCGCGAG GTCAAGTTCT CGTCGCGCGT GCCGGTGCCG
GATGCGTGA
 
Protein sequence
MSKNRASVEL DGVDRAMLRL LQEDGALSNA TLGEKLSLSV TPCWRRRKRL EDEHVITGYQ 
ANLDRRALGM NVFAFVQITF NMHSDQDPDH FEEVMRRHDE VTSCHKITGA ADYILQIVAA
DLDAYSEFVE RVLRKQAGVS SIQSSLALRE VKFSSRVPVP DA