| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3236 |
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| Symbol | |
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| ID | 6181266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 141665 |
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| End bp | 143305 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641683011 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001809925 |
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| Protein GI | 172062274 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.406194 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCGCG CCAATCCATC GGCCGGTTCG ACCTGCATTG CCATGCATAC AACAACAAGC
GCGATCGGAG AAACATCCCC GCCGGGCTCA AAACCCGCAT TCCAGCGCAG CGGTGCGTGG
CCGCATATCG TCTTCTCGGT TGCGTTGAGC ATCTGCATCC TCGTGCTCTT GATGGCGCTC
GTCGCGGCCG AACGCCTCTC ACGCGATTCG GTTGCCGAGC ATGAACGCGA CGTCGCGAAC
GACATCGTGA TCTCGGTCGA CCGCATCCTC GACGGCGTGC GCTCGCGGCA CCCGGCCGAA
TTGACCGCGC TGGTCGGGCG CCCCTGCGCG ACGGTCTTCA GGACCCTCGC CGAAGTAGGC
ACTCACCTGC GCTATCTGCG CGCCGTCGCG CTGGCCAATG ACGGTCGCGT CACGTGCTCG
TCGGCGCTGG GCTCGATCGA CGTCTCGCTC GACGCGTATG TGCACGCCCC GCCACCGGGG
ATGACGGCCA TCACGCTGCT TCGGCAGACT CCGTTCCAGC ATCACGTGCC CGTGCTGGCG
GTGTTTCGTG CAACCGCGCC CGCATCGGGC GTGCTTTATC TGATCGAAGG CGACTATCTG
GCCGACATGC TGTCGCACGG CGCGCGTTTC GGCGCGGAAA CCGCGATGCT GTCGGTCAAC
GGCGCGGGCG GTCTCGATCA GCATGGCGAA TTCGTGCCGG CGTTCCACGC GGCCCCGTCG
GCCGGCAGCA CGATCGCCTC GAGCGCGTGG CCGTTCACGG TTTCCGTCAC CTCGTCGGAA
TCCTATGTTC AGCAGGTGCA ACGGCACTAC CGGCTGATCT GCGTGACGAT CGCGCTGCTG
GTGAACGGCC TTGTCGCGGC CGCGTACCTG CTCGCGATGG CGCCGCGCCG GCTGTTGCTG
AAGGCCGTGC GCAATGCGCT GAAGCGCAAC GAATTTCACG TGGTGTACCA GCCGATCGTC
GACGTCGACA CGCGCAGGAC CGTCGGCGTC GAGGCGCTGC TGCGCTGGCA CCATCCGAAA
TGGGGGCCGA TCAGCCCGGC CGTGTTCGTC CCGCAGGTCG AATCGAGCTC GATCCTGCCG
AAGGTGACCG AATTCGTGCT GCGCACGGCC GTGTCGGAAC TGACCACACT GGCGCCGTCG
ATGCCGCTGC GCATCGCGAT CAACGTCGCG CCGAAGGATC TCGAGCGTCC GCGCTTCGTA
TCCGTCGTCG AAGAGGCGAT CCGCGGGCTT CCGCCGGGGT TCACGCTGGT GCTCGAAGTG
ACCGAGCGCA TCCTGCTCGA AAAGAATGCA CGCACCACCG CGATGTTTGC CGCGCTGCGC
GCGACGGGCG CGAGATTCGC GATCGACGAC TTCGGCACGC ATCATAGCAA CCTCGACATG
CTGTCGCGCT TTCCGTTCGA CTACGTGAAG ATCGATCGCC AGTTCATCTC GCAGCTGACG
ACCGTCAATG CCAGGCTGAT CGAAGGCATC GCGGCCGTCG CGCACCACTA CGACCTGAAG
ATCATCGCCG AGGGCGTGGA GACGGAAGAA CAGCATCGCG CGCTGCATGC GGTCGGGATT
CAGTACGCAC AGGGCTACCT GTATCAGCGG CCGCAGCGGC CGACAGACCT GAAGCGGGAT
TTCGCGCCGA TGCCGGCTTA G
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| Protein sequence | MLRANPSAGS TCIAMHTTTS AIGETSPPGS KPAFQRSGAW PHIVFSVALS ICILVLLMAL
VAAERLSRDS VAEHERDVAN DIVISVDRIL DGVRSRHPAE LTALVGRPCA TVFRTLAEVG
THLRYLRAVA LANDGRVTCS SALGSIDVSL DAYVHAPPPG MTAITLLRQT PFQHHVPVLA
VFRATAPASG VLYLIEGDYL ADMLSHGARF GAETAMLSVN GAGGLDQHGE FVPAFHAAPS
AGSTIASSAW PFTVSVTSSE SYVQQVQRHY RLICVTIALL VNGLVAAAYL LAMAPRRLLL
KAVRNALKRN EFHVVYQPIV DVDTRRTVGV EALLRWHHPK WGPISPAVFV PQVESSSILP
KVTEFVLRTA VSELTTLAPS MPLRIAINVA PKDLERPRFV SVVEEAIRGL PPGFTLVLEV
TERILLEKNA RTTAMFAALR ATGARFAIDD FGTHHSNLDM LSRFPFDYVK IDRQFISQLT
TVNARLIEGI AAVAHHYDLK IIAEGVETEE QHRALHAVGI QYAQGYLYQR PQRPTDLKRD
FAPMPA
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