Gene BamMC406_3224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3224 
Symbol 
ID6181035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp127373 
End bp128137 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content65% 
IMG OID641682999 
ProductGntR family transcriptional regulator 
Protein accessionYP_001809913 
Protein GI172062262 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAACT TCAGAGCGCG CCCGGCGACC CGGGTCGATT ACAGGAAGGG CAGCGAGATG 
AGCAAAGAGG CCGTTGAAAC CGAAGGTGGC GGCCGCCGGC ACGGCGGGCG GTATGTGTAT
GAGGAATTGC GCAAGCAGAT CCTGACGCTG AAGCTGAAAC CCGGCGTGCA GCTCGACGAA
ATCTCGCTGG CCGCGCAGTT CGGCCTGTCG CGTTCGCCGG TGCGCGACGC GATCGCGCGG
CTGAGCAGCG AGGGCCTCGT CACGATCCTG CCGAACCGCA CGACGCTCGT CACGCCGTTC
GAGATCGAGG AATTCCCGAA ATACATCTCG GCGCTCGACC TGATCCAGCG CGCGGTCACG
CGGCTCGCGG CCACGCAGCG CTCCGAAGCC GACCTCGCGA AGATCCGCAA GGCCGACGAC
ATCTACATGG AGGCCGTCGC GAGCGGCGAC TTCCAGGCGA TGTCGGAGAC CAACAAGGCG
CTCCACATGG CGATCGCGCA CGCCGCGAAC AATCCCTACT TCGTCGGCTA CTACGAGCGG
CTGCTCGGCG AAGGGCAGCG CCTGCTTCAT CTGCATTTCG ACTTCACCGT GAGCTCGCCC
ACGGCCGCCA AGCTCGGTCG CGACCACGAC GAACTGATCG ACGCGATCGT GCGGCGCGAT
GCGGACGCCG CCGAACGCGC CGCGCACGAG CACACGATGC TGTTCCAGAA GCGCTTCCTC
GATTACATGC GGCAGAACAT GACGGAGTCG ATGGCGGTGC TGTAA
 
Protein sequence
MLNFRARPAT RVDYRKGSEM SKEAVETEGG GRRHGGRYVY EELRKQILTL KLKPGVQLDE 
ISLAAQFGLS RSPVRDAIAR LSSEGLVTIL PNRTTLVTPF EIEEFPKYIS ALDLIQRAVT
RLAATQRSEA DLAKIRKADD IYMEAVASGD FQAMSETNKA LHMAIAHAAN NPYFVGYYER
LLGEGQRLLH LHFDFTVSSP TAAKLGRDHD ELIDAIVRRD ADAAERAAHE HTMLFQKRFL
DYMRQNMTES MAVL