Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3213 |
Symbol | |
ID | 6179867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 117282 |
End bp | 118232 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641682988 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001809902 |
Protein GI | 172062251 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.329095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTCGA TCGATCGACG AGACTCGACT CCCCAACTGC TGAACCGGCT GCGGATGCGG CAGATCGCGC TGCTGCTCGC GGTGGATGAA TGCTCGACGC TGCGCGCGGC CGCCGGGCAG CTGGGCCTCA CGCAGCCAGC CGCGACGAAG ATGCTGGCCG AGCTGGAAAG CGCGCTCGGC CAGCGGCTGT TCGACCGCGT CGGGCGCGGG CTCGTGCTGA ACGCGGCCGG CGAGCGCGTG CTCGGCTATT TCCGCGGGAT TCGCGGCAGC ATGGAGGCGC TCAATCGCGA GCTCGGCGAG CTGCAGCTCG GCAGCGCGGG GCGGCTCGCC ATCGGCAGCA TCATGGCCGC GTCGCCCGGG CGGCTCACCG AGGCGCTGGT GCAGTTGAAG GCGCGCTATC CGCTGCTCGC GATCGACATC GCGGTCGACA CCAGCGATCG GCTGATGCCC CAGTTGCGCG AAGGCGTGCT CGAAGTGGTG ATCGGACGCA ACGTCGGCAC CGATTGCGAC TTCCGCGTGG TGGACGACGA GGCGCTCGCG ATCATCGCGG GCCGCGACCA TCCGCTTGCC GGGGCCGGGC CGGTCGAATT CGACGCGCTG CTCGATTACA CGTGGATCCT GCAGCCGGCC GGCAGCCCGG CGCGCGAGGT CGTCGAGCGC GAGTTCCGCG CGCGTCACCA GCCGATGCCG CGCGGGCTGG TCGAGACGGG CTCGATCCTG ACGACGATGA ACCTCGTCGA CCGTTCGCAC ATGCTCGGCG TGATTCCGCT GACGGTCGCG CAGCGCAACG CGGAGCACGG GCTCGTGGCG ATCCTCGATT ACGAGCTCGG CCAGAAGCTG CCGTCGTACG GGAGTCTCGT GCGGCGCGAC CGGCCGCTGA GCATTCCCGC GCAGCAGTTT CTCGCGCTGT TCCACCGGGA AGGCGGGCCG GGCGATGACG GCGCCGCGTA A
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Protein sequence | MGSIDRRDST PQLLNRLRMR QIALLLAVDE CSTLRAAAGQ LGLTQPAATK MLAELESALG QRLFDRVGRG LVLNAAGERV LGYFRGIRGS MEALNRELGE LQLGSAGRLA IGSIMAASPG RLTEALVQLK ARYPLLAIDI AVDTSDRLMP QLREGVLEVV IGRNVGTDCD FRVVDDEALA IIAGRDHPLA GAGPVEFDAL LDYTWILQPA GSPAREVVER EFRARHQPMP RGLVETGSIL TTMNLVDRSH MLGVIPLTVA QRNAEHGLVA ILDYELGQKL PSYGSLVRRD RPLSIPAQQF LALFHREGGP GDDGAA
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