| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3211 |
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| Symbol | |
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| ID | 6179865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 114857 |
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| End bp | 116029 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641682986 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_001809900 |
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| Protein GI | 172062249 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.514043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCC GCTCCGTGCG CGCCCGCGTA TTCCAGTGGA AAGGGAAGAC CGTCCCGCCG
CAAGGCAATT TCTGCTCGAA CGCGATGGAC CTGCTGTACG CGCCGCAGGA AACCATGAGC
ACGTTCCGCT TCCATGCGTG GACCGTCGTC GAAGTCGAGA CCGACGACGG CATCGTCGGC
CTCGGCAACG TCGCGCTCGC GCCGCACGTC GCGAAAGCGA TCATCGACCA GTACCTCGCG
CCGCTCGTGA TCGGCCAGGA CCCGTGGGAC TACGAGTACC TGAACCAGCG GATGTACCGC
GCGACCCATG CGTGGGGCCG CAAGGGCATC GGCATGGCGG CGATCTCGGC GGTCGATATC
GCGATCTGGG ACATCCTCGG CAAGAGCGTC GGCAAGCCCG TGTTCAAGCT GCTCGGCGGC
CGCACGAAGG AAAAGATTCC TTGCTACTAC TCGAAGCTCT ACCGCACCGA CCTGAAAGAG
ATGCAGGACG AGGCGCAGCG CTATATGAAG GAAGGCTTCC GCGCGTTCAA GATGCGCTTC
GGCTACGGGC CCGCGCACGG GCAGCAGGGC GTGGTGGAGA ACCTGAAGTC GGTCGCGGCG
ATCCGCGAGG TGATCGGCTA CGACAACGAC CTGATGCTCG AGTGCTACAT GGGCTGGAAT
CTCGAGTACG CGAAGCGCAT CCTGCCGAAG CTCGAGAAGT ACCAGCCGCG CTGGCTCGAG
GAACCGGTGA TCGCTGACGA CATCGACGGC TACGCGGAAC TGAACCAGCT CACGCGCATT
CCGATTTCGG GCGGCGAGCA CGAGTTCTCG CTGTACGGCT TCAAGCAGCT GCTGGATCGC
AAGGCCGTGT CGGTCGTGCA GTACGACACG AACCGCGTCG GCGGGATCAC GATGGCGCAC
AAGATCAATG CGCTGTGCGA GGCGTACAGC GTGCCGGTGA TTCCGCATGC GGGCCAGATG
CACAACTATC ACCTGACGAT GAGCACGCTC GCGTCGCCGA TGAGCGAGTA CTTCCCGATG
TTCGACGTGG AAGTGGGCAA CGAGCTGTTC TATTACATCT TCGACGGCGA GCCGGTGGCC
GAGAACGGCT TCCTGCAATT GCGCGACGAC GTCCCGGGCC TCGGTCTCAC GCTGAAGACC
GAGTTCCTCG ACCAGTTCGA CATCGTCGAG TGA
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| Protein sequence | MKIRSVRARV FQWKGKTVPP QGNFCSNAMD LLYAPQETMS TFRFHAWTVV EVETDDGIVG
LGNVALAPHV AKAIIDQYLA PLVIGQDPWD YEYLNQRMYR ATHAWGRKGI GMAAISAVDI
AIWDILGKSV GKPVFKLLGG RTKEKIPCYY SKLYRTDLKE MQDEAQRYMK EGFRAFKMRF
GYGPAHGQQG VVENLKSVAA IREVIGYDND LMLECYMGWN LEYAKRILPK LEKYQPRWLE
EPVIADDIDG YAELNQLTRI PISGGEHEFS LYGFKQLLDR KAVSVVQYDT NRVGGITMAH
KINALCEAYS VPVIPHAGQM HNYHLTMSTL ASPMSEYFPM FDVEVGNELF YYIFDGEPVA
ENGFLQLRDD VPGLGLTLKT EFLDQFDIVE
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