| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3210 |
|---|
| Symbol | |
|---|
| ID | 6181273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 113931 |
|---|
| End bp | 114848 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641682985 |
|---|
| Product | dihydrodipicolinate synthetase |
|---|
| Protein accession | YP_001809899 |
|---|
| Protein GI | 172062248 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCAC GCTACCAGGG CGTCTTTCCG GTCGCGCCGA CCATCTTCGA CGCGCACGGC
GCGTTCGACC TCGACGGCCA GCGCCGCTGC CTCGACTTCA TGATCGATGC CGGCTCGCAG
GGCATCTGCA TCCACGCGAA CTACTCGGAG CAGTTCGCGC TCGGCGACGA CGAGCGCGAG
CTCGTCACGC GCACGACGCT CGAGCACGTC GCCGGCCGCG TGCCGGTGAT CGTCACGACG
TCGCATTTCA GCGCGCGCAT CTGCGCGGAA CGCAACCGCC ACGCACAGGC GTGCGGCGCC
GCGATGGTGA TGGTGATGCC GCCGTACCAC GGCGCGACGT TCCGCGTGCC CGAAGCGCAG
GTGCGCGCGT TCTTCCGCGA AGTCGCCGAC GGCCTCGACA TTCCGCTGAT GATCCAGGAC
GCGCCGGCGA GCGGCGTCGC GCTGCCTGCG TCGTTGCTCG CGACGCTCGC GCGCGAGATC
GACGCCGTGT CGTACTTCAA GATCGAGACG GCCGGCGCCG CGTCGAAGCT GCGCGAGCTG
ATCGCGCTCG GCGGCGACGC GATCGAAGGG CCGTGGGACG GCGAGGAAGG CATCACGCTG
CTCGCCGACC TCGATGCCGG CGCGACCGGC GCGATGACGG GCGGCGGCTA TCCGGACGGC
ATCCGCCGGA TCACCGACGC GTATTTCGCC GGACGTCGCG ACGAAGCCTG CGAGCAGTAT
GCGCGGTGGC TGCCGCTGAT CAACTACGAG AACCGCCAGT CGGGTTTCCT GACCGCGAAG
GCGCTGATGA AGGAAGGCGG CGTAATCGCG TGCGATCAGC CGCGCGCGCC GTGGCCCGAG
CTGCACCCCG AGGTGCGCGC GGGCCTGCTC GACGCGGCGC GGCGGCTCGA TCCGCTCGTG
CTGCGCTGGG GACGCTAG
|
|---|
| Protein sequence | MNARYQGVFP VAPTIFDAHG AFDLDGQRRC LDFMIDAGSQ GICIHANYSE QFALGDDERE
LVTRTTLEHV AGRVPVIVTT SHFSARICAE RNRHAQACGA AMVMVMPPYH GATFRVPEAQ
VRAFFREVAD GLDIPLMIQD APASGVALPA SLLATLAREI DAVSYFKIET AGAASKLREL
IALGGDAIEG PWDGEEGITL LADLDAGATG AMTGGGYPDG IRRITDAYFA GRRDEACEQY
ARWLPLINYE NRQSGFLTAK ALMKEGGVIA CDQPRAPWPE LHPEVRAGLL DAARRLDPLV
LRWGR
|
|---|
| |